Vibrio atlanticus: VS_1854
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Entry
VS_1854 CDS
T00812
Name
(GenBank) Helicase-related protein
KO
K19789
DNA repair protein RadD
Organism
vsp
Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsp03400
]
VS_1854
DNA repair and recombination proteins [BR:
vsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VS_1854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DZR
zf-tcix
zf-ribbon_3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CAV19037
UniProt:
B7VPT7
LinkDB
All DBs
Position
1:2003341..2005080
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AA seq
579 aa
AA seq
DB search
MYTLRPYQADSVKSVIHYFRKHQTPAVLVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHEKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFSNQFSLLVIDECHR
VPDEKTSSYQKVITHLRENNSGIKVLGLTATPYRLGMGWLYQYHTRGQVRSEEPRFFRDC
IFELPIRYLLDEGFLTPARMIDAPVLSYDFSQLRPTSTGRYKESELDMVIEQSKRATPQI
VDQIIELAKDKLGIMVFAATVRHAQEILGLLPEGEASIVIGDTPTLERDQIISDFKERKI
KFLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKKECLVLDYAGNSY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRKCQGYFTDEDTG
EREHCNYRFRAKYCGECGADNDIAARICHECDSTLVDPDKKLKEALNLKDALVFECLEMD
LNLLKDDKGKSQLKVTYRGENQAQVHEFWSLTTKKQKQNFKDQFVRPHLADRHRPFEESS
PTKVVAHQHRFRPPQFVIARKVGRFWKMRDKIFEDELKQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatacactccgcccgtaccaagctgactcagtaaaatcagtgattcattacttcaga
aaacaccaaacaccggctgttcttgtattgcctacaggcgcaggaaaaagcctggtgatt
gcagagctagcaaggcttgcgaaaggtcgtgttctagtgcttgcgcacgtaaaagagctc
gttgagcaaaaccatgaaaagtatgaaggttatgggctaaaaggttcaattttctctgct
ggtttagggcgtaaagagacagaccaacaagtggtgtttgcttcagttcaatccgtagtt
cgaaaccttgactcattctccaatcagttctcattattggttatcgacgaatgccaccgc
gtaccagatgaaaagaccagcagctatcaaaaagtgatcactcacttacgtgaaaataat
tcaggcataaaggtgcttggattgaccgcgacgccttatcgtcttggtatggggtggctt
taccaatatcacacacgtggccaagtgcgttctgaagagccgagatttttcagagactgt
attttcgaactgccgattcgttacttgttggacgaaggctttctaacaccagcacgcatg
attgatgcgcccgttttgagctatgacttttcgcaactaaggccgacaagtacggggcgc
tataaagaatcagaactcgatatggtgatcgagcagtctaaacgcgctaccccgcaaatt
gtcgatcaaatcattgaactggccaaagacaagcttggcatcatggtatttgctgcgacc
gttagacacgcacaagagatccttggtttactgccagaaggtgaagcttcaattgtaatc
ggcgacacaccgacactcgaacgtgaccaaatcatcagtgatttcaaggaacgtaaaatc
aaattcttggttaacgtgtcggtattaaccacaggttttgatgcgccccatgtggattta
atcgcgattttgcgcccaacagaatctattagcttgtaccaacaaatcgttggccgtggc
ttacgcctatctccgggtaaaaaagagtgtttagtgctcgactatgcgggcaacagttac
gacctttaccaaccagaggtcggagacccaaagcctgactcagacagtgaaatcatcact
attccctgccctgcttgcggcttcaataataacttttggggcaagctagacagcaatggc
ttcttactcgaacattttggccgtaaatgccaaggctactttaccgatgaagacacgggc
gaacgcgagcactgtaactatcgttttcgtgctaagtattgtggtgaatgcggcgctgac
aacgacatcgccgcacgtatttgtcatgagtgcgattccaccttagttgacccagataaa
aagcttaaggaagcgttaaacctaaaagatgccttagtatttgagtgtttagaaatggac
ttgaaccttctcaaggacgacaaaggtaagtcgcagcttaaagtcacttaccgtggagaa
aaccaagcacaagtgcatgagttttggtcattaaccaccaagaaacagaaacagaacttc
aaagaccagtttgtacgccctcaccttgcagacaggcatcgccccttcgaagaatcttca
ccaacgaaagtggtcgctcaccaacatcgatttcgcccacctcaattcgtcattgcacgt
aaagtcgggcgcttttggaaaatgagagacaagatattcgaagatgaactgaagcaatag
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