KEGG   Vibrio atlanticus: VS_1854
Entry
VS_1854           CDS       T00812                                 
Name
(GenBank) Helicase-related protein
  KO
K19789  DNA repair protein RadD
Organism
vsp  Vibrio atlanticus
Brite
KEGG Orthology (KO) [BR:vsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsp03400]
    VS_1854
DNA repair and recombination proteins [BR:vsp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     VS_1854
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 SLFN-g3_helicase AAA_22 DZR zf-tcix zf-ribbon_3 AAA_16
Other DBs
NCBI-ProteinID: CAV19037
UniProt: B7VPT7
LinkDB
Position
1:2003341..2005080
AA seq 579 aa
MYTLRPYQADSVKSVIHYFRKHQTPAVLVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHEKYEGYGLKGSIFSAGLGRKETDQQVVFASVQSVVRNLDSFSNQFSLLVIDECHR
VPDEKTSSYQKVITHLRENNSGIKVLGLTATPYRLGMGWLYQYHTRGQVRSEEPRFFRDC
IFELPIRYLLDEGFLTPARMIDAPVLSYDFSQLRPTSTGRYKESELDMVIEQSKRATPQI
VDQIIELAKDKLGIMVFAATVRHAQEILGLLPEGEASIVIGDTPTLERDQIISDFKERKI
KFLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKKECLVLDYAGNSY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRKCQGYFTDEDTG
EREHCNYRFRAKYCGECGADNDIAARICHECDSTLVDPDKKLKEALNLKDALVFECLEMD
LNLLKDDKGKSQLKVTYRGENQAQVHEFWSLTTKKQKQNFKDQFVRPHLADRHRPFEESS
PTKVVAHQHRFRPPQFVIARKVGRFWKMRDKIFEDELKQ
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtatacactccgcccgtaccaagctgactcagtaaaatcagtgattcattacttcaga
aaacaccaaacaccggctgttcttgtattgcctacaggcgcaggaaaaagcctggtgatt
gcagagctagcaaggcttgcgaaaggtcgtgttctagtgcttgcgcacgtaaaagagctc
gttgagcaaaaccatgaaaagtatgaaggttatgggctaaaaggttcaattttctctgct
ggtttagggcgtaaagagacagaccaacaagtggtgtttgcttcagttcaatccgtagtt
cgaaaccttgactcattctccaatcagttctcattattggttatcgacgaatgccaccgc
gtaccagatgaaaagaccagcagctatcaaaaagtgatcactcacttacgtgaaaataat
tcaggcataaaggtgcttggattgaccgcgacgccttatcgtcttggtatggggtggctt
taccaatatcacacacgtggccaagtgcgttctgaagagccgagatttttcagagactgt
attttcgaactgccgattcgttacttgttggacgaaggctttctaacaccagcacgcatg
attgatgcgcccgttttgagctatgacttttcgcaactaaggccgacaagtacggggcgc
tataaagaatcagaactcgatatggtgatcgagcagtctaaacgcgctaccccgcaaatt
gtcgatcaaatcattgaactggccaaagacaagcttggcatcatggtatttgctgcgacc
gttagacacgcacaagagatccttggtttactgccagaaggtgaagcttcaattgtaatc
ggcgacacaccgacactcgaacgtgaccaaatcatcagtgatttcaaggaacgtaaaatc
aaattcttggttaacgtgtcggtattaaccacaggttttgatgcgccccatgtggattta
atcgcgattttgcgcccaacagaatctattagcttgtaccaacaaatcgttggccgtggc
ttacgcctatctccgggtaaaaaagagtgtttagtgctcgactatgcgggcaacagttac
gacctttaccaaccagaggtcggagacccaaagcctgactcagacagtgaaatcatcact
attccctgccctgcttgcggcttcaataataacttttggggcaagctagacagcaatggc
ttcttactcgaacattttggccgtaaatgccaaggctactttaccgatgaagacacgggc
gaacgcgagcactgtaactatcgttttcgtgctaagtattgtggtgaatgcggcgctgac
aacgacatcgccgcacgtatttgtcatgagtgcgattccaccttagttgacccagataaa
aagcttaaggaagcgttaaacctaaaagatgccttagtatttgagtgtttagaaatggac
ttgaaccttctcaaggacgacaaaggtaagtcgcagcttaaagtcacttaccgtggagaa
aaccaagcacaagtgcatgagttttggtcattaaccaccaagaaacagaaacagaacttc
aaagaccagtttgtacgccctcaccttgcagacaggcatcgccccttcgaagaatcttca
ccaacgaaagtggtcgctcaccaacatcgatttcgcccacctcaattcgtcattgcacgt
aaagtcgggcgcttttggaaaatgagagacaagatattcgaagatgaactgaagcaatag

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