Vibrio atlanticus: VS_2103
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Entry
VS_2103 CDS
T00812
Name
(GenBank) AcrB/AcrD/AcrF family
KO
K18303
multidrug efflux pump
Organism
vsp
Vibrio atlanticus
Module
vsp_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsp02000
]
VS_2103
01504 Antimicrobial resistance genes [BR:
vsp01504
]
VS_2103
Transporters [BR:
vsp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VS_2103
Antimicrobial resistance genes [BR:
vsp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VS_2103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
MMPL
Gly_kinase
Motif
Other DBs
NCBI-ProteinID:
CAV19278
UniProt:
B7VH78
LinkDB
All DBs
Position
1:complement(2256942..2260040)
Genome browser
AA seq
1032 aa
AA seq
DB search
MKIIETISNTRLLILMTALLMVSGISAFMTLPRAEDPVIINRYANITTSFPGASAERVET
LVTEVIENKLRELSEVKLVSSTSRPSVSIVTLELNDTITEPEPVWSQARDKLSDIESILP
AGAQSPDLDSDHTYAFTTIASLTWSGAGEPDRLTLGRYAKELAKRLRTLSGTEFVDEYGM
PQEEIQISLRTADAAALGRSSANIAESLEGADAKNSAGELVSAYSRFGLEIESELDSIER
IKQVPIATDSNGHIIRMEDIASVKRGEKTPQDQIAIIDGEPGVIVAARMHPDLRVDNWTS
RANALIGKFEQELPSNVKVTVLFNQQGYTETRLDDLGKSLMIGFGLILIVLFVTLGVRAA
ILVAISLPLTSLLTLSIMKMTGVPINQMSVTGLIVALGIMVDNAVVMVDTIQAYRLKGQQ
RAEATMNALKHLWVPLLGSTLTTVLAFAPIILMPGASGEFVGGIAITVSFSLIGSYIISH
TLIAGLATKLLPKQLSDVDKKGQHHWYMTGLRIPALTRWFSSSVRFGVTHPIITIALVLL
VPFTGYWSMSQLTEQFFPPSDRDMFEIQVYMPPQASIYATKNTSEKIDDIIHRYPEVERI
DWLVGANFPSFYYNLQARQNNAPYFSQAMVKTENFDQANALIPQLQKVLDEEVPEAQILV
RKLNQGPPFTAPVELRVYGENLDTLKAIGEDVRLILAGVPHVTHTRETLQPGTPKVWLKV
DEDTAKLNGISLNQFAGMLQTTLTGRESGSVIEGSESVPIRVRVADEARENLAHLSNIRL
PISSDVYSTGINVSTLAELELTTSRGAITRRNGQRVNTIEGYIEAGVLPQTVLNEFQKRL
ASYQMPSGYTIGFGGESAERDNSVNSLISNVAVVVVLMVLVVVMSFNSFRMSSIIFMVAG
LAGGLGLLSVWIFGYPFGFTVIIAMLGIAGLAINAAIVILTELKLDKQASSGNVDAVVEA
VMSCTRHISSTTITTVGGFMPLIIAGGGFWPPFAVAIVGGTVLTTLISFYFVPVVYHLMT
KNQRKNIVTQAA
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatagagactatttccaacacgcgactgcttatcttgatgaccgcgctgctg
atggtgagcggtatttctgcgttcatgaccttgccgcgtgcagaagacccagtaatcatc
aaccgttatgcgaacatcacaaccagtttccccggcgccagtgccgagcgtgtagaaacc
ttggtgactgaggttatcgagaataagctgcgtgagctaagtgaagttaaattggtgagt
tcgacttctaggccgagcgtatcgattgtcacgctagaacttaatgacaccattaccgag
ccagaacccgtctggtcccaagctcgcgacaagttatctgacatcgaatccattttgcct
gcgggtgctcaatctcccgatctcgatagcgaccatacctatgctttcacgaccatcgca
tctctaacttggtctggtgcaggcgagcctgacagattaacgctgggccgttatgccaaa
gagctcgccaagcggttacgaaccttgtcgggtaccgaattcgttgatgaatacgggatg
ccgcaagaagagattcaaatcagtttacgtacggccgatgccgctgctctagggcgttca
agtgccaatatcgctgaatcgctcgaaggggcagacgccaagaactctgcgggagaattg
gtcagtgcctattcccgttttggtttggaaattgagtctgaactggattccattgaacgt
atcaagcaagtcccaatcgccactgacagcaatggtcacatcatccgtatggaagacatt
gcgtctgtgaaacgaggtgagaaaaccccacaagaccagattgcgattattgatggtgag
ccgggtgtgattgtcgcggcaagaatgcatcctgatctgcgagtcgataactggacgtcg
cgagccaatgctctgattggcaagtttgagcaagagttaccaagtaacgttaaggtgaca
gtcctgtttaatcagcaaggttatactgagactcgcttagacgatttaggcaaaagcttg
atgatcggttttggtctgattttgattgtgctgtttgtcactttaggcgtgcgtgccgcg
atcttagtcgccatttctctgccgttaacctcattattgaccttgtcgatcatgaaaatg
accggtgtgccgattaaccaaatgtcggtgacaggcctaattgtggcgctcgggatcatg
gtggataacgcggtggtgatggtcgataccattcaagcgtatcgtttaaaagggcaacag
cgagctgaagcgaccatgaatgcattgaagcatttatgggtgccgttattaggctcaacc
ttaactacggtgttggcgtttgccccgattatcttgatgccgggtgcatcgggtgaattt
gtcggtggtattgcgattaccgtttctttctcgttgatcggctcttacataatctcgcac
accttaattgcaggcttagcgactaagctactgcccaagcaactcagtgatgtcgacaag
aaaggccagcaccattggtacatgacgggcttaagaattcctgcattaacacgttggttc
tcatcttctgtccgctttggcgtaactcatccaatcatcacgattgctttggtgttgttg
gttccgtttactggttactggagcatgtctcagctgactgagcaatttttcccgccatca
gaccgagatatgtttgagattcaggtgtatatgccgccgcaagcgagcatttacgcaacc
aaaaatacctctgagaaaatcgatgacatcattcatcgttaccccgaagtggaacgcatt
gattggctagtgggcgctaacttcccatctttctattacaacctgcaagcaaggcaaaac
aacgcgccgtacttctcgcaagccatggtgaaaacagagaactttgaccaagccaatgcg
ctaattccacagttgcaaaaggtgttggatgaagaggtgccggaagcacaaatcttggta
cgtaagcttaaccaagggcctccatttaccgcgcccgttgaactgcgagtgtatggtgaa
aacctcgatacgttgaaagcgattggtgaggatgtgcgattgattttggcgggtgttcct
catgtgacgcacacaagggaaacgctgcaaccaggtacgccgaaggtgtggttgaaggtt
gatgaagacaccgcaaagctgaatggtatttcattgaaccagttcgcaggtatgctgcaa
actacgctgacaggtcgtgaaagtggctctgtgattgaaggcagtgagtcggtaccaatc
cgtgttcgtgtggcagatgaggcgcgtgaaaacttggctcacttaagcaatattcgtttg
ccaatcagctctgatgtctactcaacggggatcaatgtttcgactctggcagaactggaa
ttgacgaccagccgcggtgcgattactcgtcgtaacgggcagcgtgtgaataccattgag
ggctacattgaagcgggtgtcttacctcaaactgtgctcaatgaattccaaaaacgccta
gcaagctatcagatgccatcgggttacacgattggttttggtggtgaatccgctgaacga
gataattcagtcaacagccttatctcgaatgtcgccgttgtggtggtattgatggtgttg
gtggtggtgatgtcgttcaactcgttccgaatgagtagcattatcttcatggtagcagga
ttggctggtgggctagggctgttatcggtgtggatcttcggttatccgttcggctttacg
gtgatcatcgccatgcttgggattgcaggcttagcgattaatgcggccattgtgattctg
acggaattgaaactcgataagcaagcctcatcaggcaatgtggacgcggtcgttgaggcg
gtgatgtcgtgtactcgccatatcagctcgacaacgattacaaccgttggtggctttatg
ccattgatcattgctggtggcggtttttggcctccatttgcagtcgcgattgtcggcggt
acagtattaaccacgcttatctcgttctactttgtgcctgtggtttatcatttgatgact
aaaaatcagcgtaaaaacatagtgactcaagctgcgtaa
DBGET
integrated database retrieval system
