Vibrio atlanticus: VS_2153
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Entry
VS_2153 CDS
T00812
Name
(GenBank) Ribonuclease HI
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
vsp
Vibrio atlanticus
Pathway
vsp03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VS_2153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsp03032
]
VS_2153
Enzymes [BR:
vsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
VS_2153
DNA replication proteins [BR:
vsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
VS_2153
Prokaryotic type
Elongation factors (bacterial)
RNase H
VS_2153
Elongation factors (archaeal)
VS_2153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
Cauli_VI
Motif
Other DBs
NCBI-ProteinID:
CAV19328
UniProt:
B7VHV8
LinkDB
All DBs
Position
1:complement(2309511..2310284)
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AA seq
257 aa
AA seq
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MAKKYYVVWKGRTPGIFTTWNECKSQVDGFAGARYKSFPTLGEAESAFGGKTSSGSGSSA
TKPSSAGKATKAKVPPLSEQQITDMPFDIKIFTDGACEPNPGEAGTGLAVYQNNQLTELW
YGLYQPVGTNNTAELHGLKQAFVLAKEKLNAGLSVAIYCDSKYSIDCITKWATGWEKKGW
TKSGGEIKNLDIIKPAYALYQELASKITIYHVNGHVGIEGNELADRMSIVAISSKEQELA
QYRDIEDLESILALRAG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagaagtattatgtggtttggaaaggtcgtacaccgggtatttttactacttgg
aatgagtgtaagtcgcaagttgatggttttgctggtgcgagatataaatcgtttccaaca
ctaggcgaggccgagtctgctttcggtggtaaaacgtcgtctgggtcaggttcttcggct
acaaagccaagctctgcggggaaggcgacgaaagctaaggtgccgcctctttcggagcag
caaatcacagatatgccttttgatatcaagatctttaccgatggtgcttgtgaaccaaat
cctggtgaagcagggacggggttagcggtctaccaaaacaaccagttaacagaattgtgg
tatggcttgtatcagcctgttggtaccaacaataccgccgagttacatgggcttaagcaa
gcgtttgttctcgcgaaagagaagttaaacgcaggcctctctgttgcgatttattgtgac
tctaagtactcgatagattgtattactaagtgggcaacgggttgggagaaaaagggctgg
accaagtcgggcggcgagatcaaaaacctcgatattattaagcctgcgtatgctctctac
caagaactggcttcaaaaatcaccatctaccatgtgaacggtcacgttggtattgaaggt
aacgaattggccgatagaatgtcgattgtggctatttcatcgaaagagcaggagctagct
caatatcgtgacatcgaagatcttgagtctattttggcacttcgagccggctag
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