Vibrio spartinae: Vspart_01407
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Entry
Vspart_01407 CDS
T07037
Symbol
lgrD_3
Name
(GenBank) Linear gramicidin synthase subunit D
KO
K24101
L-arginine---[L-arginyl-carrier protein] ligase [EC:
6.2.1.63
]
Organism
vsr
Vibrio spartinae
Brite
KEGG Orthology (KO) [BR:
vsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
vsr01008
]
Vspart_01407 (lgrD_3)
Enzymes [BR:
vsr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.63 L-arginine---[L-arginyl-carrier protein] ligase
Vspart_01407 (lgrD_3)
Polyketide biosynthesis proteins [BR:
vsr01008
]
Nonribosomal peptide synthetase (NRPS)
Nonlinear NRPS
Vanchrobactin synthetase
Vspart_01407 (lgrD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
Thioesterase
PP-binding
AMP-binding_C
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Motif
Other DBs
NCBI-ProteinID:
QMV14155
UniProt:
A0A7D8BBK0
LinkDB
All DBs
Position
1:1574042..1582585
Genome browser
AA seq
2847 aa
AA seq
DB search
MKDHQVPEEQYALIGTQQGIWFGQQVMPRPESLNVAHYIEIDGTLDLERFTQAVNHGVAA
ADSLHVEYLDVDGAIKQRGFAPEHAQDVLEVMDFSQSALVEASALAWMKADLATPIELQG
TSPRYRHCLIDVSESGQPKWLWYQRYHHIDVDGFSFNAITQHIVSEYNRLMLGTAKPAPF
TPFKAVIAEHQQFYQSEACQHARSFWQNQASQLPDIMSLATGGRRRSASGVEKFTIELAG
GDWLHRGGHQVLPSEFAMALVFAYLHLVSGAQHVCVGFPFMRRMGSSAARSTGAVVNVLP
LTLAVEPTMTISDVAKSMNKVIRQTRRHQMYDAEQIQRDSGRVGQALYGPILNYKPFEEE
INLAGTKGHTHILSAGPIDDIEFSPQLKHDQLSLTLTANAETYSRQSLALHARRFAQMVG
QIARNPDRPLHALDIVPSCEQANIARWSTGRVSEERLQARSVLTVFAGQVKQKPHAIALS
FAQQRWTFAQLDQAITTRAQQITAFGAGKGDMIGVALPRSAETIITMLAVLRAGAVYLPL
DLAYPQERIETILAQARPKGVIVEQTESLPWQSLTHCISLTALASLNVTESEHPELEIAP
SDVAYIVFTSGSTGKPKGVMNTHGALVNLLDSHRQSVFANAIHRLAEQQQCDESDVQVRA
AHTTSFSFDASWEQVIWMLCGHTLHLYDDEQRKDACELTEKVAQDQINALDLPPSLLSQM
LDNGLMTASHVPTLVLIGSEAVPEPLWSRVKAYPDLLVENCYGPTEFTVDAVSASLNVDD
TPVIGQPILNAKAYVFDTQLNPVAVGEVGELYLAGAGLAKGYLNQPGMTAERFVADPFGH
GQIMYRTGDLVKWRDNGQLAFIGRSDDQVKVRGFRIELGDVESAMNAIDGVETTVVIAQR
HGASHRLIAYCTLVNHARSQLDEHSLLTQIAAAVPEYMVPAALVIMAQFPLNVNGKIDRQ
ALPEPTIVSGNTWVAPVNHQQQVLCDAVAELLGADKVGTADDFFALGGDSISAMGLGTLL
RKAGYELRPRDIFSARQLRGMAELMQPLRRQVTQNQDGDILPLPMWRWFEEHFAEHTRYV
QGVFVEIESDVTLAHLQAGLTQLVANHSACRLIKQETRYVIQSMAQLKVDTWVETMQVAD
LDHADLDGVFAHASQMLSPDSQMLRLVQMRDRTGRCGLMILAHHLMIDGVSWRILLPQLN
TLVRAQVNGVKAEMTPEVTGLNTWSQALCQHLPQLTQQASDWITQESRFVEPCKPPAEKG
NVVHRRVLLPTVLTQSMLSHCQDSQAIDIDELLMAAVTSALGQCYQKEAIKLYLESHGRE
EFDASLNLSQTLGWFTTEFPLVIDLPAAGEISALLRQVKQAKRRVKDKGLGYMSLRYLDS
LSLDNPYCETLTALSQQHPASLLFNYLGRFEQTQAMWTPVSRAGQFADSFAVSLNSEHAL
LHPLELNIFVDESDNEAQFALNWAWDDAQFSHDEIDTICDRITQQLAVMLHWMNAQQALQ
VSLRVAAEYTQTGVSLDDAAAFANRFGPLRDILPALPLQEGLLFQSQLGDENSNYNSTTR
LTFQGEVNPQQVQRALNAVITRHPQLGAKFDSSILGRTVQLMSQTDVSWPLTCVDIRSES
AQQQQTYLAQAEKQTLVRQFDLHHLDESLLDATLIHHGDGQSTLFVSAHHLVVDGWSTPI
LLGDFLTAYAQGTPSLPPVSASYADVVSQLKQRDKGQAGLLWQQVLQDVTPTIAFEDVPV
DDQVKEHALIIDAEKTQQLSQRLSAYGLTMNSLMQGVWSCILGSMTGREDVVFGTPVSGR
FGHVKGIDEQIGLFSNTIPVRMKLDAKQSLLAQLQAHQATQIQLLEHDELGLGEIQQLAG
GETLFDTLLVVENYPDHSAWYDQDYQGATLTHIHNRGYTHYPFTILVLPGEQIHVLFEYR
DTVGIAQQVMQRFATVLQAVIDAPERPLTQLDLRLDDEIALQQRINQTAAEVSQQTLRSL
MAAQAARTPEQIALVDSDYRLSYQAMREHVIAIANLLVRQDVGVGDVVAVALPRSVKLSL
AFNSIIECGAAYLPLDVSYPDERLAYMIHDAKPKLIVTTSEHQARFGDYGPLLILDELPD
PTPLSDVPGQPVLDPAHGAYIIYTSGSTGNPKGVLVSHRAIVNRLQWMQSEYQLNHHDVV
LQKTPCSFDVSVWEFFWPLIQGATLVMAPPESHKDPEWLMAVIEDYQVTTMHFVPSMLAA
FMASVEANAEQLTIEQMTAEQTAQVAPSLQRVFCSGEALSKALTHVYAKWIDAPLHNLYG
PTEAAVDVTYCPAFGDPIDESLGHSVPIGLPVWNTQLYVLDSFLRATPVGVPGELYLAGD
QLAIGYLNRSALTADRFIANPFEHGERMYRTGDVVRWLPSGKIEYLGRSDDQLKIRGQRI
ELGEIETALQSLPGVKQALVCAKALGSDTLGSDKSITGADDRQLVGYVILNASEQTDGEA
LKAALSTHLPAHMVPIAIIVLEAFPLSANGKLDRKALPLPSDIVTGERRKARPGLEAQLV
AIFADVLGIDTLGIHTLSAEDDFFALGGHSLMAMKLAADIRRVLNVPVTVGQIMVNPTVE
KLALLLLDDEARNDPTLAGFGEVLPIRAGNGPALFCINSASGFAWQYTGLPKYLQGNYPI
VGLQSPRPSGAIAAGADMQAACDIHMQALKKIQPHGPYHLLGYSFGGTVAQSLAAQLQQQ
GETVAFLGLLDTYPPEGQDWDGPMNEEAQEEIEREKDLFLAANDVTDDELDQQRAAMFQD
ISANYADAVRLLSGARSSPYEGRVDLFVAQRTLPQGYDIDHHWQPFLTQLEQHHFDCSHE
DILAPEHVGDIGEHLNALLCQVETLQS
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccatcaagtgccagaagaacagtatgctctgattggtacgcagcaggggatt
tggtttgggcagcaagtcatgccaagaccggaatcattgaatgtcgctcattacatcgag
attgacggcacgctcgatttagaacgcttcactcaggccgtcaatcatggtgtggcagcc
gcagactcgctgcatgttgaatatctagacgttgacggagcaatcaaacaaagggggttt
gcgccggaacatgcgcaagatgttttggaagtgatggacttttctcagtcggcattggtg
gaggcgtctgcgctggcgtggatgaaagccgatctcgcgacgccgattgagctacaaggc
accagcccaagatatcgtcactgtctgatcgatgtcagcgagtcggggcagccgaaatgg
ctatggtatcagcgttatcaccatattgatgtggatggattcagttttaacgcgatcacg
cagcatatcgtcagtgaatacaaccggctgatgctggggacagcaaagccagcaccgttt
acaccgttcaaagcggtgattgccgagcatcagcaattttatcagtctgaagcatgtcaa
cacgcccgcagtttctggcaaaaccaagccagccaactgcccgatatcatgtcactcgcg
accggcgggcgacggcgctcggcctccggtgtcgaaaaattcacgattgaactggcgggt
ggggattggctgcaccggggcggtcaccaagtgctgccttcagaatttgccatggcgtta
gtctttgcctacttacatttagtgtcaggtgcgcaacacgtatgtgtcggcttcccgttt
atgcgtcgtatgggaagttcggcagcgcgttcaaccggcgccgtggtcaatgtactgcct
ttgacactcgcggttgagccaacaatgactatctctgatgtcgcgaagtcgatgaacaag
gtcattcgtcaaacccgccgccatcaaatgtacgatgcggaacaaatccagcgggattcc
ggcagagtcgggcaggcgctgtacgggccaatactcaattacaaaccgtttgaagaagaa
atcaatctggccggaacaaaaggtcacacacacattctttccgctggtccgattgatgac
attgagttctctccgcagctcaagcatgaccaattgagcctgacgttaacagcgaatgcc
gagacatattcccggcaatcactggctttacatgcccggcgtttcgcccagatggtcggg
cagattgcccgcaacccggatcgaccgctacacgctctggatatcgtcccaagctgtgaa
caggcaaatatcgcccgctggtctacgggacgtgtgtcggaggaacgtctgcaagcgcgt
agcgtgttgaccgtgtttgcgggtcaggtaaaacagaagcctcatgccattgcgctcagt
tttgcgcagcaacgctggacatttgcccagcttgatcaagccatcacaacgcgagcgcag
cagataaccgccttcggggccggcaagggcgatatgattggggttgccttaccacgcagc
gccgaaacgatcatcacgatgttggcagttcttcgggcgggcgcggtctatcttcccctt
gatttggcatatcctcaggagcgtatcgaaaccatcttagcgcaggcccggcccaaaggc
gtgattgtcgaacagaccgaatcactgccgtggcagagcctgacacattgcatctccctg
acggcgcttgccagcctgaatgtcaccgaatcagagcatcctgagcttgaaattgcccct
tcggatgtggcttatatcgtctttacctctggctcgaccgggaaacccaaaggcgtgatg
aatacccatggcgcgttggtgaacttattggattcacaccggcagtctgtttttgccaac
gcgatccatcgccttgcagagcaacagcagtgcgatgaaagtgatgtacaagttcgggca
gcgcataccacatcgttctcatttgatgcgtcttgggagcaagtgatctggatgctgtgc
gggcatacccttcatctgtatgacgatgagcagcgtaaagatgcctgtgaactgaccgaa
aaagtcgcacaagaccagatcaatgcattggatctgccgccttcactgttgagccaaatg
cttgataacggcttgatgacagccagccatgtgccgacactggtgttaatcgggagtgaa
gcggtgccggaaccactctggtcaagagtcaaagcctacccggacttgctggttgaaaac
tgctatgggccgacggagtttacggtggatgcggtcagtgcatcattgaacgtcgatgac
accccggtgatcggtcagcctattttaaatgccaaagcttatgtgttcgatacacagttg
aatcctgttgccgtcggtgaggtcggtgagttgtatctggccggtgccggactggcaaaa
ggatatctcaatcagcccgggatgacggcagaacgatttgttgcggacccgttcggccat
gggcaaatcatgtatcgaaccggtgacttggtgaaatggcgcgacaatggtcagttggcg
tttattggtcggagcgatgaccaagtcaaagtgcgggggttccgtattgaactgggcgat
gttgaaagtgcgatgaatgcgattgacggtgtcgagaccaccgtggtcattgcccagcgt
catggcgcgtcacaccgactgatagcttactgcaccttggtgaatcatgcccggtctcag
ttggatgagcacagcttgttgactcaaattgctgccgccgtgcctgaatatatggtgcct
gctgcgctggtgatcatggcgcaattccccctcaacgtgaatggcaaaattgaccggcaa
gcactgcctgaaccgaccattgtgtctggtaatacctgggtcgcgccggtcaatcatcaa
caacaagtgctgtgtgatgcggtggctgagttgctcggtgccgataaagtcggcaccgca
gatgatttctttgctttgggtggcgatagtatctctgcgatgggcttgggcacattactg
agaaaagccggttatgaactgcgtccccgggacattttctcagcccggcagttaagggga
atggctgagttgatgcaacctctgcgccgtcaagtgacgcagaatcaggacggggatatt
ttgcctttgccgatgtggcgttggtttgaagaacactttgccgagcacacccgctatgtt
caaggcgtctttgtcgagattgaatcggatgtcaccttggctcatcttcaggccggattg
acccaactggttgccaatcattccgcgtgccgactgatcaaacaagagacgcgttatgtg
attcagtcgatggcgcagctcaaggtggacacttgggtcgagacaatgcaagttgcagac
cttgatcacgcggatttagatggtgtgtttgcccacgcgagtcaaatgctctcgccagac
agtcagatgctccggctggtacaaatgcgggatcgtaccgggcgttgcgggctgatgatc
ctcgcgcatcacctgatgattgacggggtttcctggcgaattctattaccgcagttaaat
acgctcgtccgggcccaagtgaacggtgttaaagctgagatgacaccggaagtgactggg
ctgaacacatggtcacaagccctctgtcaacatttgccacagttgacgcaacaagcatcc
gattggattacgcaagaatcccgttttgttgaaccatgcaaaccgccagcggaaaagggg
aacgtcgttcaccgtcgcgtattgctgccgacggtactgacgcaaagtatgctcagccac
tgccaagattcacaggcgattgatatcgatgagttgctcatggctgcggtgacttcagcg
ctgggacagtgttatcaaaaagaggcgatcaagctgtatttggagtctcatggccgcgaa
gagtttgatgcttcactgaacctcagccaaacgctgggttggtttacgaccgaattcccg
ttagtcatcgatttgcccgcagcaggtgagatttcagccttactcagacaggtgaagcaa
gcgaagcgacgtgtcaaagacaaaggcttgggttacatgtctctccgctatctcgacagc
ctctctctcgacaacccctattgcgagacgctcaccgcgttatctcaacagcatccggcc
tcgttattgttcaactatctgggccgttttgagcagacacaggccatgtggacgcccgtc
agtcgggcaggccagtttgctgactcgtttgcggtgtcactgaacagtgagcacgcgctg
ttacatccgttagagctgaatattttcgttgatgagagtgataacgaggctcaatttgcg
ctcaactgggcttgggatgacgcgcagttcagccatgatgagatcgataccatttgtgac
cggatcacgcagcaacttgcagtcatgctgcattggatgaatgcacaacaagcgctacag
gtctcgctgcgggttgctgctgaatatacgcaaaccggcgtctcgcttgacgacgcagcc
gcgttcgcgaatcgctttggcccgctgcgcgatattctgccagctttgccgctgcaagaa
gggttgctgttccaatcacagttaggcgatgagaatagcaattacaactcaaccaccaga
ctgacttttcaaggcgaggtcaatccgcagcaagttcagcgagcgttaaacgcagtgatc
acgcgtcatccgcaactcggggctaaattcgacagctcgattttaggccggacggttcag
ctgatgtctcaaaccgatgtgtcttggccattaacgtgtgttgatatccgcagcgagagc
gcgcaacagcaacagacctaccttgcgcaagccgaaaagcaaacgcttgttcgtcagttc
gatctccatcacctggacgaatccttgctcgatgcgacgctcatccaccatggcgacggg
caaagcacactgtttgtttctgcgcatcacttggttgtcgatgggtggtcaaccccgatt
ttgctgggggattttcttactgcatacgcacaaggtacgccaagcctgccccccgtatcg
gccagctatgccgatgtggtcagccagttgaaacaacgtgataaaggacaggccggcctg
ctgtggcagcaagtgctgcaagacgtcacgccgaccatcgcatttgaagatgtgccggtt
gacgatcaggttaaagagcatgcactaatcattgatgcggaaaaaacccagcaactcagt
caacggctgagtgcttatggcctgacgatgaactcgctgatgcagggggtttggtcatgt
atcctcggcagtatgaccggtcgcgaagatgtggtgtttgggacgccagtctcggggcgt
ttcggccatgtcaaaggcattgatgaacagatcggtttgttcagtaataccatcccggtg
cggatgaaacttgatgccaaacagagcttgttggcgcaattgcaagcgcatcaggcaacg
cagattcaactgctggaacatgatgaactgggcttgggtgaaattcagcagttagccggt
ggcgaaacgttattcgataccttgttggtggtggaaaattacccggatcattcagcgtgg
tacgaccaagattatcagggggccaccctgacccatattcacaatcgcggttatacccat
tatccattcaccatactggtgcttcccggtgagcaaattcatgtgctgtttgagtaccgg
gacacggtcggtattgcgcagcaagtgatgcagcgttttgcaacggtgctgcaagccgtt
atcgatgcgcctgaacgaccactgacgcagcttgatttacgtctggatgacgaaatcgcg
cttcagcaacggatcaaccaaaccgccgcggaggtgagtcagcagacgttacgttccttg
atggccgcgcaggcagcgcggacgccagaacagattgcactcgtcgatagtgactatcgt
ttgagttatcaggcaatgcgtgagcacgtgatcgctatcgcgaatctgcttgtccggcaa
gatgtgggcgtgggagatgtggttgcggtcgctctgccaagaagtgtcaagctcagcctt
gccttcaacagtattattgaatgtggcgcggcttaccttccgttggatgtgagttatccc
gatgagcggttggcttatatgatccatgatgccaagccgaaactgattgtgaccacgtct
gagcatcaagcccgttttggtgattatggtccgttgttgattttagatgagttacccgac
ccaacaccattgagtgatgtgccgggccaaccggttctggatccggcgcacggggcatat
atcatctatacctcaggttcaacggggaatccgaaaggtgtgctggtgtctcaccgggcg
attgtgaatcgtttgcaatggatgcagtctgagtatcagctcaatcaccatgatgtggtg
ttgcagaaaacaccatgcagttttgatgtgtcggtgtgggagttcttctggccgctgatt
cagggcgcgacgttagtgatggcaccaccagagtcacacaaagatccggagtggttgatg
gcggtgattgaagattaccaagtcaccaccatgcactttgtgccgtcgatgctcgcggcc
tttatggcctcggtcgaagccaatgctgaacagcttactattgaacagatgactgctgaa
cagacggctcaagttgcgccgagcttacagcgcgtcttttgctcgggcgaggcgctgtct
aaagcgctcacccatgtctacgcgaagtggattgatgcgccgttacataatctgtacggc
cctacagaagccgcagtggacgtgacatattgtccggcatttggcgaccccatcgacgaa
agccttggtcacagtgtgccgattggtttaccggtatggaatacccagctgtatgtgttg
gatagttttctgcgagcaacaccggtcggggtgcccggtgagttatatctcgccggtgat
caactggcgattggctacttaaatcgcagcgcgctgaccgcagaccggttcattgccaac
ccgtttgagcatggggagcgtatgtatcggaccggggatgtcgtgcgttggttaccgtcg
ggcaaaatcgaatatctgggcagaagtgatgaccagctcaaaattcggggacagcgcatt
gaactgggagaaatcgaaacggcgctgcaatcgctgccgggggtgaagcaagcgttggtg
tgtgcgaaagctctcgggtcagacacactcgggtcagacaagagcatcaccggtgctgat
gatcgccaattggtgggctatgtgattctcaatgccagtgaacaaacggatggtgaagcg
ctgaaggctgccttatccacgcatctaccggcacatatggtaccgattgcgatcatcgtg
ctggaagcgtttccgctcagcgcgaatgggaagttggatcgcaaagcgttgccgctgccg
agtgacattgtgacgggagaaaggcgtaaagcccgccccggtctggaagcccaactggtg
gctatttttgccgacgtacttggtattgacacccttgggattcataccctgtcggcagaa
gatgacttctttgcgttggggggacactctttgatggcgatgaagttagcggcagacatc
cggcgggtgttgaatgttccggtgaccgtcggccaaatcatggttaacccgacggtcgaa
aaactggcgctgttactgctggatgatgaggctcgcaatgatccgacgctggccggtttt
ggcgaagtccttccgatccgggcaggaaatggtccggcgttattctgtatcaactccgca
tcggggtttgcttggcaatacaccggattaccgaaatatctgcaaggcaactatccgatt
gtcggacttcagtcgccacgaccgtctggtgccattgcagcgggggccgatatgcaagcg
gcttgtgatatccatatgcaagcgctgaaaaaaattcagcctcacgggccttatcattta
ttgggatattcatttggcggcaccgtggcgcagagcctcgccgctcagcttcagcagcag
ggggaaactgtggcgtttcttggtttactggacacttacccccctgaagggcaggactgg
gacgggcctatgaatgaagaagcgcaggaggaaattgagcgggagaaagacctgtttctg
gccgccaatgatgtgacagatgatgagcttgatcagcaaagagccgcgatgtttcaagat
atctcagccaactatgcagatgcggtgcggctgctttcgggggcgcgctcctcaccgtat
gaggggcgggtcgatctgtttgtggcgcaacgaacactgccacaaggctatgatatcgac
caccactggcagccgtttctgacgcagttagaacagcaccactttgattgctctcacgag
gatattctcgcgcctgagcatgtcggtgacatcggtgaacacctcaatgcattgttgtgt
caggtagagaccctccagtcataa
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integrated database retrieval system
