Vitreoscilla stercoraria: LVJ81_09470
Help
Entry
LVJ81_09470 CDS
T08153
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ81_09470 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vst03019
]
LVJ81_09470 (pcnB)
Enzymes [BR:
vst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LVJ81_09470 (pcnB)
Messenger RNA biogenesis [BR:
vst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LVJ81_09470 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UOO91859
LinkDB
All DBs
Position
complement(1942430..1943791)
Genome browser
AA seq
453 aa
AA seq
DB search
MNSKKKLSPLLTTDLPSLPVHIWDGNEFGLSLSRLSHAAQKVVKQLHQSGYDAMVVGGGV
RDLLVGQSPKDFDIATNATPEEVKAVFKRSRIIGRRFRIVHVMMGAETIEVTTYRGGDQM
QQNEQGRIMRDNTFGSQAEDALRRDFTCNALYYDAIANQVIDYHHGMADIQKRRLVMIGE
PKQRFREDPVRVLRALRLSTKLGFELDDAIANVMAECAPWLAAEPPARLVDELIKLLLSG
HALACLQNVRRFGIQANVHPFLQVLMTQDLNEPFIQLALKNTDLRIKQGKHVSVGFLLAA
LLWPKVRDQWQFFIASGLKKSMALSAAVESVREELDGSRWGLPHRMTAMCREIWQLQSQF
DNQKGQRPYRLIAQPRFRAAYDFLLLRYEVGEADTEAALWWQRFQEVSTHEREAMVGTAA
RPYSEAVEAVVIEQPKKRRRRRRPKNTSMIHEN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaaaaagaagttatcccctttgttgaccactgatttaccatcgttacctgtc
catatttgggatggtaatgagtttggtttgagcttgtcgcgcctaagccatgcagcgcaa
aaagtggtcaaacaattacatcaatctggctatgatgccatggtggtcggcggcggtgta
cgtgatttattggtgggtcaatcgcctaaagattttgatatcgctaccaatgccacgcca
gaagaagtcaaggcagtgttcaaacgcagccgcattattggtcgccgttttcgcattgtg
catgtgatgatgggtgctgaaaccatcgaagtgactacttatcgtggtggcgatcagatg
cagcaaaatgagcaaggtcgcatcatgcgtgacaacacgtttggctcgcaagctgaagac
gctttgcgtcgtgattttacatgcaatgctttgtattacgatgccatcgccaatcaggtt
attgattatcatcatggtatggcggacattcaaaaacgccgcttggtgatgataggcgag
cctaagcagcgttttcgcgaagaccctgtgcgagtgttgcgtgctttgcgtttgtcgacc
aaattaggctttgaattggatgatgccatcgccaacgtgatggcagagtgtgcgccgtgg
cttgccgctgaaccgcctgcacgtttggtcgatgagttgatcaaattgttattgtctggt
catgctttggcgtgtttgcaaaatgttcgccgttttggcatacaagcgaatgtgcatccg
tttttacaagtattgatgacacaagacttgaacgagccttttattcagttggctttgaaa
aataccgacttgcgtatcaaacaaggcaaacatgtgtcggtaggttttttattggcagca
ttgttgtggcctaaagtgcgagaccagtggcaattttttatagcaagcggcctgaaaaaa
tctatggctttgagtgcggctgtggaatcagtgcgagaagaactcgatggtagtcgctgg
ggtttgccacatcgtatgacggctatgtgccgtgagatttggcaattgcaatcgcaattt
gacaatcaaaaaggtcagcgtccttatcgcttgattgcacaaccacgtttcagagcggcg
tacgactttttgttgttgcgctatgaggtaggagaagctgatactgaggcggcgctgtgg
tggcagcgtttccaagaagtatcgactcatgaacgtgaggccatggtgggtactgcggcg
cgcccttattccgaagcggtagaagcagtggttatagaacaacctaaaaaacgccgccgt
cgccgtcgtccgaaaaacacttctatgattcatgaaaattaa
DBGET
integrated database retrieval system
