Vitreoscilla stercoraria: LVJ81_10685
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Entry
LVJ81_10685 CDS
T08153
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
vst
Vitreoscilla stercoraria
Pathway
vst00521
Streptomycin biosynthesis
vst00523
Polyketide sugar unit biosynthesis
vst00541
O-Antigen nucleotide sugar biosynthesis
vst01100
Metabolic pathways
vst01110
Biosynthesis of secondary metabolites
vst01250
Biosynthesis of nucleotide sugars
Module
vst_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LVJ81_10685 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LVJ81_10685 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LVJ81_10685 (rfbC)
Enzymes [BR:
vst01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LVJ81_10685 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
FdtA
SQAPI
Motif
Other DBs
NCBI-ProteinID:
UOO92082
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All DBs
Position
2194579..2195133
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AA seq
184 aa
AA seq
DB search
MKITQTFFGCVHLIDIPRYQDERGWFSESQHQQQYASLFNMPEPVFVQSNISQSKQNVLR
GLHTQINHPQGKLIQVLQGKIYDVFVDIRPQSAHFKQWQAVVLDSEKSQQLWIPPGFAHG
FLSLAENTTILYHCTNYYAPNDQLSILWDDNDLDIDWPLFNQAPVMSEKDLLGMSLKEFV
TCVS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacccaaaccttttttggctgtgtgcatttaatagatatccctcgttatcaa
gatgaacgtggttggttcagcgaatcacaacatcaacaacaatatgcaagtttattcaat
atgccagaacctgtatttgtgcaaagcaatatttctcaatcaaaacaaaatgttttacgt
ggtttacatactcaaataaaccatcctcaaggcaaactcattcaagtcttgcaaggtaaa
atttatgatgtttttgtagatattcgccctcagtctgctcatttcaaacaatggcaagcc
gttgttttagattcagaaaaaagccaacaactatggattccaccaggctttgcccatggc
tttttaagcttggcagaaaacaccacaatattgtaccattgcactaattattatgctcct
aatgaccaattgagtattttatgggatgataatgacttagacatagattggccactcttc
aatcaagcgccagtgatgtcagaaaaagacttattaggaatgtcattaaaggaatttgta
acatgcgtgtcttga
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