Varunaivibrio sulfuroxidans: P3M64_10205
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Entry
P3M64_10205 CDS
T08892
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
vsu
Varunaivibrio sulfuroxidans
Pathway
vsu01501
beta-Lactam resistance
vsu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
P3M64_10205
01503 Cationic antimicrobial peptide (CAMP) resistance
P3M64_10205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsu02000
]
P3M64_10205
01504 Antimicrobial resistance genes [BR:
vsu01504
]
P3M64_10205
Transporters [BR:
vsu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
P3M64_10205
Antimicrobial resistance genes [BR:
vsu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
P3M64_10205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
DUF3382
Motif
Other DBs
NCBI-ProteinID:
WES30007
LinkDB
All DBs
Position
2158893..2162033
Genome browser
AA seq
1046 aa
AA seq
DB search
MGKFFIDRPVFAWVVALVIMLAGGLALLRLPIEQYPAIAPPSVKITAAYPGASAQTVENA
VTQVIEQQMNGLDHLRYMSSTSSANGVAEITLTFNPDADPDIAQVQVQNKLQLAIPSLPA
EVQRQGIKVAKANNSFLMVVGFVSPDGGMTQGDIADYVASNLLDPLSRVDGVGEVRLFGA
KHAMRIWLDPNKLLSFGLTTTEVEAAIRAQNTEVSAGQLGGAPAVKGQQINAPIIALSRL
KTAREFGNILIRVNPDGARIRLRDVARIEVGAESYQIHAKYNGAPAAGLGISLATGANAL
NTAKAIRARVDELKTFFPKSLEVIYPYDTTPFVRVSITEVFKTLGEAVVLVFLVMFLFLQ
NLRATLIPTIAVPVVLLGAFGILSAFGFTINTLTMFGMVLAIGLLVDDAIVVVENVERVM
SEDGLSPREATRKSMDQITGALIGIALVLSAVFVPMVFFGGSVGAIYRQFAITIVSAMLL
SVVVALTLTPALCATMLKPVHGDAYRKRGAFGWFNRAFDRSSRFYRDSVGHVIGRRVRYL
IVYVLIVSALGVALMRLPTGFLPNEDQGIMFSMVQLPPGASQERTDAVLTQIERHFRKDE
AKTVAGVFTVSGFSFSGSGQNMGIAFVKLRDWSQRTTPQTSIKAIIGRAMAAYAHIQDAR
AFAFSPPAITQLGNATGFDLQLLDRGGLGHDALLKARNQMLGMAARSPLLVGVRPNGMSD
TPQFHLLIDQEKAGALGVSLSDVNATLSTAWGGTYVDDFMENGKIKRVYMQGEASARMMP
ADLDKWYVRNARGKMVPFSAFTSVQWRSGSPRLERYNGTPSMEILGSPAPGVSSGQAMAA
IEQIAAKLPPGISYGWTGLSLEERMSTSQAPALYGLSLIVVFLCLAALYESWTIPVSVML
VVPLGVLGAVLASLFRGLPDDVYFQVGLLTTIGLSAKNAILIVEFARRLYDGGMDLLEAT
KEAARQRLRPIVMTSMAFILGVLPLAISTGAGAGGRIAIGTSVMGGMISATILAVFFVPL
FFSLVVRLFARKRDRRDVPPSGDGVA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagttttttatagatcgcccggtgttcgcgtgggttgtcgctcttgtcattatg
ttggcggggggcttggccctgttgcggttgccgatcgaacagtacccggcgattgccccg
ccgtcggtcaagattaccgcggcatatcccggcgcgtcggcgcaaacggtcgaaaacgcg
gtgacacaggttatcgaacagcagatgaacggcctcgatcatttgcgttatatgtcgtcc
accagcagcgccaacggggttgccgagattaccctgacgttcaatcccgacgccgatccg
gacatcgcccaagtccaggtgcagaacaaactgcaactggcgatccccagtctgcccgcc
gaggttcagcgccagggaattaaggtcgccaaggcgaacaacagcttccttatggtggtc
ggtttcgtctcgccggacggcggtatgacccagggcgatatcgccgattacgtagcgagc
aatttgctcgatcccctgagccgagtcgatggtgtcggcgaagtgcggctgttcggcgcc
aagcacgccatgcgtatctggctcgatcccaataagctgctcagcttcggcctcaccacg
accgaggtcgaggccgcgatccgcgcccaaaacacggaggtttccgccggccagttgggt
ggcgccccggcggttaagggtcagcagatcaatgccccgatcattgccctgagccgtctg
aagacggcgcgggaatttggcaatattctgatccgcgtcaaccccgatggcgcacgaata
cgcctgcgcgacgtggcgcggatcgaggtcggcgcggaaagttaccagattcatgccaag
tacaatggcgcgcccgccgccggactcgggatatccttggcgaccggggccaacgcccta
aataccgccaaggcgatacgggcgcgcgtcgatgaattgaagacctttttcccaaaaagc
ctggaagtcatttatccctacgacaccacgccgttcgtcagggtttcgatcaccgaggtg
ttcaaaaccctgggcgaggcggtggtcctggttttcttggtcatgtttcttttcctgcaa
aaccttcgtgcgacgctgatcccgaccatcgccgtgccggtggtcttgctgggcgcgttc
ggcattctttccgccttcggcttcaccatcaacaccttgaccatgttcggcatggtcttg
gccatcggccttctggttgacgacgccatcgtggtggtggaaaacgtcgagcgggtgatg
agcgaggatggtctctcgccgcgcgaggcgacgcgcaaatccatggatcaaatcaccggc
gccctgatcggcatcgccctggtgctgtccgcggtgtttgtgccgatggttttttttggc
ggctcggtgggagcgatctatcgtcaattcgccatcaccatcgtctcggcgatgctcttg
tccgtggtcgtcgccctgacgttgaccccggcgttgtgcgctaccatgctcaagcccgtg
cacggtgacgcctatcgaaaacggggggcgttcggttggttcaaccgcgcctttgaccgc
tccagccgtttttatcgcgacagcgtcggccatgtgatcggacggcgggtgcgttatttg
attgtctatgttttgattgtgtcggcgctgggggtggccttgatgcggttgccgacgggg
ttcctgcccaacgaggaccaggggatcatgttttcgatggtccaacttcccccgggggcg
tcccaggaacgcaccgacgccgttttgacgcaaatcgagcggcattttcgcaaggacgag
gcgaaaacggtcgccggtgtgttcacggtatcgggcttcagcttctccggtagcggccaa
aatatggggatcgccttcgttaaattgcgcgactggtcgcagcgcacgacgccgcaaacc
agcatcaaagcgatcatcgggcgggccatggcggcctatgcccatatccaggatgcacgc
gctttcgctttttccccgccggcgatcacccagttgggcaacgccaccgggttcgacctt
caattgctcgaccgcggcggcctcggccacgacgccttgttgaaggcgcgcaatcagatg
ctgggcatggccgcccgttcaccgctgttggtcggcgtgcggcccaacggaatgagcgac
acgccgcaattccatcttctgatcgaccaggaaaaggcgggcgcgctgggagtctccctg
agcgatgtgaacgccaccctgtcaaccgcatggggggggacctatgtggacgattttatg
gaaaatggtaaaatcaagagggtctatatgcagggcgaggcctcggcccgaatgatgccc
gcggacctggacaagtggtacgtgcgcaacgcgcgcggcaagatggtgccgttctcggcg
ttcaccagcgtgcagtggcgttcgggctcgccccgtttggagcgctataacgggacgcca
tcgatggaaattctcggctctccggcgcccggcgtcagctccgggcaagcgatggccgca
atcgagcaaatcgccgcaaaattgccgcccggcatcagttatggatggaccggcttgtct
cttgaggagcgcatgtccacgtcgcaggctccggcgctttacggcctgtcgttgatcgtg
gtgttcttgtgtttggccgctctgtacgaaagttggacgataccggtatcggtgatgctg
gtggtgccgctcggcgtattgggcgcggtgctggcgtcactgttccggggcctgcccgat
gacgtgtacttccaagtcggactgctgacaaccatcggcctgtcggcgaaaaacgccatc
ttgatcgtcgaattcgcccgtcgtctttacgatgggggcatggatcttctggaggccaca
aaggaggccgcccggcagcggttgcggcccatcgtcatgacctcgatggcctttatcctt
ggcgttttgccgttggcgatcagcaccggggcgggggccggcgggcggatcgccatcggc
accagcgtcatggggggtatgatctccgcgaccattttggcggtcttcttcgtccccttg
tttttctctttggtcgtgcgtctcttcgctcgaaaacgggatcgccgggatgttcctccg
tccggcgatggcgtcgcctga
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integrated database retrieval system
