Vigna umbellata (ricebean): 124827523
Help
Entry
124827523 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124827523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124827523
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124827523
BRITE hierarchy
Motif
Pfam:
Ub-Mut7C
Motif
Other DBs
NCBI-GeneID:
124827523
NCBI-ProteinID:
XP_047156551
LinkDB
All DBs
Position
Unknown
AA seq
1691 aa
AA seq
DB search
MSPTKIEPEEVEGEIIGSTDYFFVKVGEAVPLKSSDFNFEVETLPSQAIAISERFRLTFV
AHSCGFFVVRTKDLIDSANEFKEKRNGSPVEQLSLVDVSIGRIRSLTLSTDNLTLAAVTS
LSGDIWFYYVESFLNKEVKQSFSCSLDDSALVKDMRWITTQKNSYIVLSNTGKLYHGEIG
FPLKQVMDNVDAVDWGMKGSFVAVASKSVLSILSIEFEERVSISLSFGSWIGDSAANNSI
KVDYVKCIRPDSIVIGCVQVTEDGKEENYLVQVIRSRHGEINDKCSELVVQSFYDIYQGL
IDDIVPVGSGPYLLSVYINQCQLAINANLKNTDQHIILLGWSADDDKSEAAIVDIERDKW
VPRIELQENGDDNLLVGLCVDNVSIYQKVGVQLGVEEMTELSPICVLVCLTLEGKLVMFH
VASLAGNKDSPEIVSVLHNYENTSLESHPGYKGCTFSEGLQKQEDKTFEVNGNLMAKPSG
SLQQITCSDTKDSEVKLVANSQSLSSNEQQVVSVVDANRDTGNQNPFGSGEPQKILGQKT
AALGTNIGSLTVNNHSASSGLPETTEKTRELWTGNSSRDSQRAFNLFPGEKFSFPKESDV
SSVSASSYADGVGFQDRKYTMGATNVSGIIGGKPFVVQDMNKSPAINSTSKLAQNRGQLS
PLVAGNMLPALNSSSHLSSDSNTAAMKSSATKFLPSNEQHGTSTKLGISSSDLSKQFGNI
NEMTKELDLLLRSIEVAGGFKDACTRSLQCSIEEVELGMDALSKKCKLLMSQVDEHHEEV
HYLLNKTIRVMARKIYLEGVYKQASDSRYWDLWNRQKLNSELELKRQHILSLNQDLTNQL
IELERHFNALELNKFSQNGGRGMGHGPSQNRYGPSRYVQSLHSLHSAINSQLVAAENLSD
CLSKQMSALSLRSQTEERKNLKELLETIGIPYEEAFGSPDTKCFMKTPPSKKILFSDLTV
NKDQSRRNQTSAVKSCEPETARRRRDSLDRSWTCFEPPKTTVKRMLLQELQKLNKKESLY
SMNKEKKATTLEGSAPRQTDARIPSVVFPSKMKANILNSHLQLEEVSEKSKAFIPADSLR
APTQFSECTSSVLPKGNALFIPPQSAFHLSPTMVHGYSTETKDLAAEKSTVQKFDFASNN
ENKPTLHWKIAQKSSIPTYSTTETPSMQTISSEMPITKSKMTIVTSSTTVDKPSSAFTPE
TLRKVFPSSETQSSTTSTSSHFLGKVTEFHVDKSLPKENVPAVPTFSFVPSSTAKTSSSP
PSSSVPSAAVPVAASVTSNSLTSLNTTTDSNLAMSSSSSPFLHFSNQKPKDTVTSLPNPP
GFKSSLGPLKSETQPASVSKSDIQPASLLKADIQPAAVSNSKTDPDAAAEVVTRPNEPVS
NASELKLEPTRKFSPTIDQSSSNNITSFDLNAIPVSQAARPSDTPLQFSTSFLSSASASS
GKNEGLEVGISHEDEMEEEAPETSNNTAELSLGSFGGFGISSSPNPSMPKSNPFGASFNN
VATSLSSSTVSFSVPNGAMFKPASFTFSNPQSSAQTQTTNPGAFSGGFNTGAAGPDQAPP
SGFGKPAQIGSGQQVLRSVLSGFGQSRQLGSGLPGSGFSPPSGFGRGFAGSGSTNTAIGG
GFAGIASTGRGFAGVAGAAPPGAGFGAVSSNGGFAGAGSGGGFGAFSSQGNSGFGAAGGS
KPPELFTQMRR
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctacaaaaattgaacccgaagaggttgaaggagaaataatcggtagcacagat
tacttcttcgtgaaagtcggtgaggctgttccgttgaaaagctccgatttcaattttgaa
gttgaaacccttccctcgcaggctattgccatctctgagcgctttcgtctcacttttgtg
gctcattcttgcggttttttcgttgtgaggacaaaggaccttattgattccgcaaacgag
tttaaggagaagagaaatggctctcccgtggagcaactgagtcttgtggatgtttctatt
gggaggatacgttcattgactctttccacagataatttgacactggctgctgtgacttct
ttgtccggagatatttggttttactatgttgaaagctttctgaacaaggaagttaagcaa
tccttttcctgttcactcgacgattcagccttggtcaaggacatgcgttggataacaaca
caaaaaaattcttacattgtcctttcaaatactgggaaactatatcacggagagattggt
tttccacttaaacaagtgatggacaacgttgatgctgttgattggggtatgaaaggttca
tttgttgctgttgcaagtaagagtgttctaagtattttatcaattgagtttgaagaaaga
gtttcaatttcactctcctttggatcatggattggtgattctgcagcaaataatagtata
aaagttgattatgttaagtgcattcgacctgattctattgtaattggatgcgttcaagtt
actgaagatggcaaggaggaaaattatcttgtccaagttattagaagccgacatggtgaa
attaatgataaatgttctgaattagttgttcaatccttctatgatatataccaagggtta
attgatgatattgtaccagtgggaagtgggccttaccttttatcggtgtacataaaccaa
tgccaacttgcaatcaatgccaacttgaagaatacagatcagcacattatattacttggt
tggtcagcagatgatgacaagagtgaagctgcaattgttgatattgaacgagataaatgg
gttccaagaattgaacttcaagaaaatggtgatgataatttactagtggggctatgcgtt
gataatgtttcaatctatcaaaaagttggagttcaactgggtgtggaagaaatgacagag
ctttcaccaatttgtgttcttgtatgtcttacattagaaggaaaacttgtcatgtttcat
gttgccagtcttgcaggaaataaagattcaccggagattgtttctgttctgcacaattat
gaaaatacttctctagaaagccatccaggatataaaggttgcactttttctgagggattg
cagaagcaggaagataagacttttgaggttaatgggaatctgatggccaagccctctggc
agtcttcaacaaataacatgttctgatactaaggactcagaagtgaaattagtggcaaat
tcacagagtctatcgtctaatgaacaacaagttgtttctgttgtagatgcgaatcgagat
actggtaatcaaaatccatttggttcaggagaaccacaaaagatcttaggtcaaaagact
gcagcccttggaactaacattggttctttaacagtgaacaatcattctgcttcttctggt
ttaccagaaactactgagaagaccagggagctgtggacaggaaatagctcacgggactcg
cagagagcttttaatctatttcctggtgaaaaattttcattcccaaaagagtcagatgtg
tcttcagtttcagcttctagctacgctgatggtgtgggttttcaagatagaaagtatacc
atgggtgccacaaatgtttctgggattataggtggaaaaccctttgttgtacaggatatg
aataaatctccagccatcaattccaccagtaagctagctcagaataggggacaactatct
cctttagtagctggaaatatgctaccagcgttgaatagcagttcacatttgtcatctgac
agtaatactgcagctatgaagtcttctgctacgaaattccttccttcaaatgagcagcat
ggaacttcaactaagcttgggatatccagttctgatttatccaaacagtttggcaatatt
aatgagatgactaaagaattggatctacttttgagatcaatagaagtggctggtgggttc
aaagatgcttgcacaaggtcactacaatgttcaattgaagaagtggagctaggcatggat
gctttgtctaaaaaatgcaaattattaatgtcccaagtggatgaacatcacgaggaagtt
cattatcttcttaacaagacaatacgagttatggcaagaaaaatatatttggagggcgta
tataagcaagcttctgatagccgatattgggatctatggaataggcaaaagttgaattca
gaacttgagctaaaacgacagcatatattgagtctgaatcaggatttgaccaatcagtta
attgaattggagaggcatttcaatgcccttgaactgaataaattcagtcaaaatggtggc
cggggcatgggtcatggaccttcccaaaatagatatggaccttcgagatatgttcagtca
ttgcatagtttacatagcgcaatcaattcacagcttgtagctgcagaaaatctctctgat
tgcctttcaaaacaaatgtcagctttgagtttaaggtctcaaactgaggaaagaaagaat
ttgaaggagctacttgaaacaataggaattccatatgaggaagcttttggctcaccagac
acgaaatgttttatgaagactccacctagtaagaagattctgttttctgatttgacagtt
aataaagatcaatctaggagaaatcaaaccagtgcagtgaagagttgtgaaccggaaacg
gccaggaggagaagagactcacttgaccggagttggacctgttttgaacctcctaagacc
accgtcaagaggatgctactgcaagaacttcagaaacttaataaaaaagaatcattatat
tcaatgaataaagaaaaaaaagctaccacgttagagggatctgctcctcgtcagacagat
gctagaattccttcagttgtattcccttctaaaatgaaagcaaacattctaaattctcat
cttcaacttgaagaggtgtcggaaaaatcaaaggcatttatacctgctgacagcctccga
gcacccactcaattttcagagtgtacatctagtgttttgccaaaaggtaatgctttattc
atacccccacagtctgcattccatttgtcaccaacaatggtgcatggttattccacagag
actaaagatttggctgctgaaaaatcaactgttcaaaagtttgattttgcttcaaataat
gaaaacaagcctaccctgcattggaaaatcgctcaaaaatcatcaatacctacctattca
accacagaaacaccttcaatgcagactatatccagtgaaatgcccattacaaagagtaaa
atgactattgttacgagttccacaaccgtagacaaaccttctagtgcgtttactcccgag
actttgagaaaagtcttcccgtcatctgagacacagtcatctactacttctacatcgtca
cacttcctgggaaaagttactgaattccacgttgataaaagcctgcccaaggaaaatgtt
cctgcagtccccacatttagctttgtgccatcttcgactgctaagacatcatcctcccca
ccatcatcatctgtcccatctgcagcagtgccagtagcagcgtcagtgacatcaaatagc
ttgactagtttgaacaccactacggattcaaatcttgccatgtcatcatcttcatcacct
tttcttcacttttctaatcagaaacctaaagacacagtgacatcgctacctaacccacct
ggctttaagtcttccttagggccacttaagtcagagactcaaccagcttccgtatctaaa
tcagatattcaaccggcttctctactgaaagcagatattcaaccagctgctgtgtctaat
tcaaagactgatccagacgctgctgcagaagtagtcactagaccgaatgaacccgtaagt
aatgcatctgaattgaagcttgaacctacaaggaaattcagtcctactatcgatcaatct
tcctccaacaatataacaagttttgatctcaatgcaatcccagtttctcaagctgcacga
ccttctgatactcccttgcagttttcaacttctttcctttcttctgctagtgcttcaagt
gggaaaaatgagggtttggaagttggaatttcacatgaggatgagatggaggaagaagct
cctgagacaagtaacaacacggctgaacttagtttgggaagttttggcgggtttgggatt
agctcaagccctaacccatcaatgcctaagtcaaatccttttggggcttcatttaataat
gtagcgactagtttatcaagctctacagtttcattctctgttcctaatggagcgatgttt
aaaccagcatcttttactttctcaaaccctcagtcatctgcgcaaactcagacaacaaat
cctggtgcattctctggtggcttcaatactggcgcagctggtcctgatcaagctcctcct
agtgggtttgggaagccagctcaaattggatcagggcaacaggttcttagatcagtactc
agtggttttggacaatcaagacagcttggtagtggtttacctggaagtggtttttcccct
cccagtggttttggtcgtggatttgctggaagtggttctactaacactgccattggtgga
gggtttgctggcatagcatcaacaggcagaggctttgctggtgttgccggtgctgctcct
cctggtgctggttttggtgctgtttcttcaaatggaggatttgctggagctggttcaggt
ggtggttttggagcatttagcagccaagggaatagtggatttggtgcagctggcggcagt
aagccacctgagctattcacacagatgagaaggtag
DBGET
integrated database retrieval system
