Vigna umbellata (ricebean): 124838732
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Entry
124838732 CDS
T09662
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124838732
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124838732
BRITE hierarchy
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
124838732
NCBI-ProteinID:
XP_047170367
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MAVVSSSSSSMRVFFFLLLALFIHLQAAMATTTPQISHLRNVEVKKHRLPSLQNSSMAER
ALEAEKLNEQAAVANPEEVVSMVEMSIQNSTQRRNLGFFSCGTGNPIDDCWRCDPNWQRN
RKRLADCGIGFGRNAIGGRDGKFYVVTDPRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDM
VIQLKQELIMNSFKTIDGRGANVHIANGACITIQFVTNVIIHGLHIHDCVPTGNAMVRSS
PTHFGWRTMADGDAISIFSSSHIWVDHNSLSHCADGLVDAVLGSTAITISNNHFTHHNEV
ILLGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAN
PTINSQGNRYNAPVNPFAKEVTKRVETAESQWKGWNWRSEGDLLLNGAFFTPSGAGASAS
YARASSLGAKSSSMVGSMTSNAGALGCKRGRQC
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtttcttcttcttcttcttccatgcgggtcttcttttttctccttctggcg
ctgttcattcacctacaagcagccatggccaccaccactccacagatctctcacctcagg
aatgttgaagtgaaaaaacacaggctgccgagcttgcagaactcgtcaatggcggagagg
gcactggaggctgaaaaattaaatgaacaagctgcagtggctaacccagaggaagtggtt
tcaatggttgagatgagcatccagaatagtacacagagaaggaatctggggtttttctct
tgtggaactggtaaccccattgatgattgctggcgttgtgaccccaactggcagcgcaac
aggaagcgtcttgcagattgtggcattggatttggcagaaatgccattggtggtcgtgat
ggaaagttctatgttgtgactgaccccagggatgatgatcctgtgaaccccaaacctggc
actcttcgtcatgctgtgatccaggacaggcccttgtggattgtgttcaagagggacatg
gttattcagttgaagcaagagctaattatgaacagcttcaagaccattgatggaagagga
gccaatgtgcacattgctaatggggcatgtatcacaattcagtttgttaccaatgtcatc
atccatggtctgcatattcatgattgcgtacctaccggaaatgccatggtgaggagctcc
cccacccactttgggtggaggacaatggctgatggagatgccatctccatatttagctca
agccacatttgggttgaccacaactccttgtcccactgtgctgatggccttgtggatgct
gtcttgggctcaacagccattactatttcaaacaaccacttcactcaccacaatgaggtg
attctgctgggccacagtgactcttacacaagagacaaactcatgcaagtgaccatcgca
tacaaccatttcggagagggacttatccagagaatgccacggtgtagacatggatatttt
cacgtggtgaacaatgactatactcactgggaaatgtatgccattggtggaagtgctaac
cccaccattaacagccagggaaaccgatacaatgctcctgttaacccttttgcaaaggag
gtgactaagagagtggaaacagcagaaagtcagtggaagggttggaattggaggtctgag
ggagatttgttgctgaatggtgcctttttcacaccatcaggagccggagcctcagccagc
tatgccagggcctcaagcttaggtgccaaatcttcttccatggttggttccatgacttcc
aatgccggtgcactaggttgcaaaagaggccgtcagtgctag
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