Vigna umbellata (ricebean): 124844681
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Entry
124844681 CDS
T09662
Name
(RefSeq) probable dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124844681
Enzymes [BR:
vum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
124844681
Ribosome biogenesis [BR:
vum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
124844681
BRITE hierarchy
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
124844681
NCBI-ProteinID:
XP_047177619
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MLALIQNCSMPLARTVRPPSRTQVQPYFSSAVRASMSPRVKSPSQVLLGLSEKELEQLAL
NCGQETYRGKQLYHFLYQRKFREIKDFYQLPQGFRNNLEEAGWKVGRSPIFETVTAADGT
VKLLLKLEDNRLIETVGIPVTDDIGLSRLTACVSSQVGCPLRCSFCATGKGGFSRNLQRH
EIVEQVLAIEEVFKHRVSNVVFMGMGEPMLNLTAVLEAHRCLNKDVKIGQRMITISTVGV
PNTIKKLASHKLQSTLAVSLHAPNQKLRETIVPSAKSYPLDALMSDCSDYFRQTNRRVSF
EYALLAGVNDSVDHAAELAELLHGAGSGYHVNLIPFNPIEDSEYKRPSKRAVLAFSGALE
SAKITVSVRHTRGLDANAACGQLRNKFQKTPLVTDPIGLGVSC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgattcagaactgctccatgccactcgcacgtacggtgcgacctccgtct
cgcacgcaggtgcaaccttatttctcgtccgctgtgcgtgcatccatgtccccacgtgtc
aaatccccctctcaggttctccttggtttgtcagagaaggagctggaacagcttgccctt
aactgcggtcaggaaacctacaggggcaagcaactttatcatttcttataccagaggaag
tttagagaaattaaggatttctatcagttgcctcagggttttaggaataatcttgaagaa
gctggatggaaggtggggcggtctcctattttcgaaactgtaactgcagctgatggaact
gttaagttgttgttaaagttggaggacaatagattgattgaaactgttggcattccagtt
acggatgatataggtttgagtcgcctcacggcatgtgtctcatcacaggttggttgccct
ttacgctgctccttttgtgccactggaaaaggggggttttcaaggaatcttcagagacat
gaaatcgttgaacaggtcttggccattgaggaggtcttcaagcatagggtgtcaaatgta
gtgtttatgggaatgggtgaaccaatgttaaatctgacggcagtacttgaagcacaccgt
tgcttgaataaggatgtgaaaattgggcaaagaatgataaccatctccactgtgggcgtt
ccaaatacaataaagaaacttgcttctcacaaacttcaatctaccttagctgtgagcctg
catgctcctaatcagaaacttagggagacaattgttccaagtgcgaaatcctaccctctg
gatgcacttatgtcagactgcagtgattactttcggcaaaccaacaggcgggtttccttt
gaatatgcacttttagctggagtcaatgactcggtagaccatgcagcagaacttgctgag
ttactccatggagcgggcagtggatatcatgtcaacttgatacctttcaatccaatagag
gactctgagtataagcgtccttccaagagagcagtgctagcattttctggcgctttggag
tctgctaaaataactgtcagtgttcgtcatacaagagggttggatgcaaatgcagcttgt
ggccagctacggaacaagttccagaaaactcctctggtcaccgaccctattggtcttgga
gtaagctgttga
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