Vigna unguiculata (cowpea): 114171470
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Entry
114171470 CDS
T06017
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vun03036
]
114171470
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114171470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
DNA_primase_S
AAA_27
Motif
Other DBs
NCBI-GeneID:
114171470
NCBI-ProteinID:
XP_027912276
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Position
2:complement(30890354..30902340)
Genome browser
AA seq
790 aa
AA seq
DB search
MEDDGGESSSFVVGIIENRAKEVGLAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI
VIILPPNKLVSNCSAAVTELVDRFYGSVKKVVLARGCFDDTKGAILIKNLAAKEPSALGL
DTYYKQYYLCLAAAAATLKWTEAEKGIVVTNHSLLVTFNGSFDHMNIDATSVHNLEIIEP
FHSTLLGTSKQKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLCQILRKFPKETDRVLCHFCFKPKKVIAEGLAIERAKKSQVLVSSVILLKTALDAL
PLLSKVLKDAKSSLLSNIYKSVCENEKYDLIKKRIGEVIDEDVLHARVPFVACTQQCFAV
KAGIDGLLDISRRSFCETSEAIHNLANNYREDFKLPNLKLTFKNRQGFHFVIPQKNIQGK
LPSKFIQVVKHGNNIHCSTLELASLNARNKSAAAECYTRTEVCLEELMDNIRENVSVLTL
LAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNI
FLSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTLRVVDRMFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSRRSLIVMDELGRATSSTDGFAMAWSCCEHLLSLKAY
TIFASHMENISELATIYPNVKILHFHVDLKNNHLDFKFELKEGTTRIPHYGLLLAEVAGV
PSSVIETARTITSRIAEKEEKRMEVNCIQHYSIQRVYHAAQRLLCLKYCNQDEDTIRQAL
RNLKETCTNH
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatggtggagagagttcgagtttcgtggtcggtatcatcgagaacagagcg
aaagaggttggattagctgcttttgatttgagatcagcttcactgcacctttctcaatat
attgaaactagcagttcatatcaaaacacaaagacactactgcatttttatgatcccata
gtgatcattcttcccccaaacaagttagtatccaattgttcggctgcagtaacagaattg
gttgatagattttatggttcggtcaagaaggtagtgctagcccgtggttgttttgatgac
acaaagggtgctatcttgataaaaaaccttgctgcgaaggaaccttcagcacttggtttg
gacacttattataagcagtattatctgtgtctggctgctgctgctgccactttaaagtgg
acggaagcagaaaaagggattgttgttacgaatcactcattgttggtcacctttaacgga
tcatttgatcacatgaatatcgatgcaactagcgtccataatttggaaattattgagcca
tttcattctaccctactgggaacaagcaaacaaaaaagaagtctgtttcacatgctcaag
acaacaaaaactattggagggactagactacttcgtgccaatctgttgcagcctctaaaa
gacattgagacaatcaatgctcgacttgattgcctagatgagttgatgagcaacgaacaa
ctattttttggcctttgtcagattttgcgtaaatttccaaaagagaccgatagagtctta
tgtcacttctgctttaagcctaaaaaagttatagcggagggcttggcaattgaacgggct
aaaaagagtcaagtgctagtatctagcgtaatcctccttaagacagccttggacgccctt
cctttgctatctaaggtgctcaaggatgcgaaaagttcccttctttcaaatatctacaag
tcagtttgtgaaaatgagaaatatgatcttattaagaaaaggataggggaggttattgat
gaagatgtacttcatgcacgtgttccttttgttgcatgtactcaacaatgctttgctgtt
aaggctggcattgatggccttttagatatttcacgaagatcattttgtgaaaccagtgaa
gccatccacaatcttgcaaacaattatcgagaggattttaagttgcccaatttaaagctt
acctttaaaaacagacaaggatttcactttgtaataccacagaagaatattcaaggaaag
cttccaagcaagttcattcaggttgttaaacatggcaacaatattcattgctcgactttg
gaactagcatctttgaacgctaggaataaatctgcagctgcagaatgctatacaagaaca
gaggtttgtctggaagaacttatggataacattcgtgaaaatgtctctgtgttgacacta
cttgctgaagtcttgtgcttgctggatatgattgtcaattcatttgctcatatgatatca
actaagcccgttgatagatatacaaggccagaatttacagagaatgggccattggcaatt
gattctggtagacaccctatcctggagagcatacacaatgactttgttgccaataatata
tttttgtcggaagcctcaaacatggtgattgtaatgggccccaatatgagtggaaagagt
acgtaccttcaacaagtttgtctcatagttattcttgctcaagttggatgttatgttccg
gctcgtttctcaactcttagggtagttgatcgtatgtttacaaggatgggcgcagttgat
aatcttgaatccaactctagcacgttcatgacagagatgaaagaaacagcttttatcatg
cagaatgtttcgcggaggagtctgattgttatggatgaacttgggagggctacttcatcc
acagatggatttgcaatggcgtggagttgctgcgagcatcttttgtcgcttaaagcgtat
actatatttgccagtcatatggaaaacatatcagagttagcaactatctatcccaacgtg
aaaattcttcactttcatgtggacttaaaaaacaaccacttggacttcaagtttgagctt
aaggaaggaacgacacgtatcccccattatgggcttctgttagcagaagtggcaggagta
ccaagttcggttattgagactgccagaacgatcacaagtaggattgcagaaaaggaagag
aagagaatggaagttaactgtatacagcactattcaatccagagggtataccatgctgca
cagcgcttgctatgcctcaaatattgcaaccaagatgaggatacgattcgccaagctttg
cggaatcttaaagaaacctgtaccaaccattga
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