Vigna unguiculata (cowpea): 114194593
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Entry
114194593 CDS
T06017
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vun
Vigna unguiculata (cowpea)
Brite
KEGG Orthology (KO) [BR:
vun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vun03021
]
114194593
03036 Chromosome and associated proteins [BR:
vun03036
]
114194593
Transcription machinery [BR:
vun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114194593
Chromosome and associated proteins [BR:
vun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114194593
SLIK complex
114194593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
114194593
NCBI-ProteinID:
XP_027940727
LinkDB
All DBs
Position
8:complement(35536057..35555547)
Genome browser
AA seq
1759 aa
AA seq
DB search
MAFFRNFTNDTVSHGVLEDKTQGQNANRTHRSVGNECTDATSSEKEFDMNMEAQYESEGE
PNGSGRLQTEATTDDGDAVKDSNLQTAGSKTATMGRWGSTFWKDCGQMGPQNGSESGQES
KSGSDYRNADGSEDNSLDGRAERLDSDDDDGQKEAGKGPRGLSDVPAEEMLSDEYYEQDG
EEQSDSLHYGGIKKPSESNSWPQRMSTTANRTLHRNSRFSDDAEDDDDDDGDNDNDGDDA
DYEEEDEADEDDPDDADFEPATTGHAGNKDKDWEGEGSDEDDDSDENIAVSDDDESFYAK
RPKGRQRGKIGQNIKSTRDRKAYAASGRQRRLKSSFEDNESTTEDSDNNSDEDFKSSKKR
GVHARKNNGRSSSATGLSMRNSEVRTSSRTVRKVSYVESEESEEVDEGKKKKTQKEEIDE
EDTDSIEKVLWHQPKGTAEDAERNNRSTEPVLMSHLFDSEIDWNEMEFLIKWKGQSHLHC
QWKSFAELQNLSGFKKVLNYTKKIMEDMRYRRSISREEIEVNDVSKEMDLDIIKQNSQVE
RIIADRISKDNSGDVIPEYLVKWHGLSYAEATWEKDTDIAFAQNAIDEYKAREAAMAVQG
KMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK
TVQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRASREVCQ
QYEFYNEKRPGKPIKFNALLTTYEVVLKDKAVLSKIKWSYLMVDEAHRLKNSEAQLYTTL
SEFSTKNKLFITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENELANLH
TELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVS
LLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLVRLHET
KHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLS
TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDIL
ERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEE
SKKRLLSMDIDEILERAEKVEEKEADGEQGNELLSAFKVANFCNDEDDGSFWSRWIKPDS
VFQAEEALAPRSARNIKSYAEVDPSERTNKRKKKEPEPPERVQKRRKPEYSAPAVPMIEG
ACVQVRSWSYGNLSKRDALRFSRSVMKYGNESQVDLIAAEVGGAVGAAPTGAQVELFNAL
IDGCTEAVELGNLDVKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIDRYEDPIAQFRVLS
YLKPSNWSKGCGWNQIDDARLLLGIYFHGFGNWEKIRLDERLGLTKKIAPVELQHHETFL
PRAPNLKDRANALLEQELAVLGVKNTNSKVGRKPSKKERDNVISLVRGQEKKKKSGSVNV
QMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQ
QTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEEEPYKQDRMTVRLWKYVSTFSHLSGE
RLHQIYSKLRQEQDEAGVGPSHGNGSVSASFTRNGNLFRRHMERQRGLKNMSTYQTPEPV
DNSGKSEAWKRRRRAESDNQFQGQPPAQRSGSNGVRITDPNSLGILGAGPSDKRFGNEKP
YRTQPGGFPSRQGFSSGIK
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atggctttcttcaggaactttacaaatgatacagtctcacatggtgtcttggaagataaa
acccaaggacagaatgcaaatagaactcatagatcagtaggtaatgagtgtaccgatgca
acttctagtgagaaagaatttgatatgaacatggaggcacagtatgagagtgagggcgaa
cctaatggttccgggagactgcaaactgaggcaacaactgatgacggagatgctgtgaaa
gactcaaatttgcagactgctggtagtaaaacagctacaatgggaaggtggggttcaaca
ttttggaaggactgtgggcaaatgggccctcaaaatggttctgaatctgggcaggaatca
aaaagtggatcagattatagaaatgctgatgggtctgaagataattcattggatggaaga
gcagaaagattagactcagatgatgatgatggacaaaaggaggcaggaaaagggccaaga
ggtctctcagatgttcctgctgaagagatgttgtcagatgagtattatgagcaggatggg
gaagagcaaagtgattcactgcactatggtggtatcaaaaagccctctgaatcaaattca
tggccacaacggatgtcaaccactgcaaatagaactttgcataggaattcaaggttttca
gatgatgctgaagatgatgacgatgatgatggagataatgataacgatggtgatgatgct
gattatgaagaggaggatgaagcagatgaagatgaccctgatgatgcagactttgagcct
gccacaactggtcatgctggaaataaggataaagattgggaaggtgaaggctcggatgaa
gatgatgacagtgatgaaaatatagctgtctcagatgatgatgaatctttctatgcaaaa
aggcctaaaggaaggcaacgaggtaagattggacaaaacataaaatctaccagagatcgc
aaagcgtatgctgcatctggtcggcaaagaagacttaaatcatcttttgaggacaatgag
tcaacaacagaggactctgacaataacagtgatgaggatttcaaaagctcaaaaaagcgg
ggtgttcatgctcgtaaaaataatggtcgttcttcttcagctactggtctttccatgcgc
aacagtgaggttcggacatctagtaggactgttagaaaggtatcatatgtggaaagtgaa
gaaagtgaagaagtcgatgaagggaaaaagaaaaagacccaaaaggaagaaattgatgag
gaagatactgattccattgaaaaggtgctttggcatcaaccaaagggcacagctgaagat
gccgaaaggaataaccgatcaacagagcctgttttaatgagtcacttgtttgattcggaa
attgattggaatgagatggaatttttgataaaatggaaagggcaatcacatttgcactgt
caatggaaatcttttgcggagctgcaaaacctcagtggttttaagaaggttttgaattat
acaaagaaaataatggaagacatgaggtacaggaggtcaatttcaagagaggagattgag
gtcaatgatgttagtaaggagatggatttagatattataaaacagaacagtcaggtggaa
aggataattgcagatagaatcagtaaagataattctggcgatgttattccagaatacttg
gtcaagtggcatggactatcttatgctgaagcaacttgggaaaaggacactgatattgct
tttgcccaaaatgctattgacgagtataaggctcgtgaggctgctatggcagtgcaagga
aagatggtggattctcagcgtaagaaaagtaaagcaagtttgcggaagcttgaggaacaa
cctgagtggttgaagggtggtaagctccgtgattatcaacttgagggtctgaattttctt
gttaacagttggagaaatgatacaaatgtcattttagctgatgaaatgggccttggaaaa
actgttcagtcagtctcgatgcttggttttctacagaatgcccagcaaatctatggtcct
tttcttgtagttgttccgctctccactttatcaaattgggccaaagaattcaggaagtgg
cttcctgatatgaatattatcatatatgttggtactcgagctagtcgagaggtttgtcaa
cagtatgaattttataatgaaaaaagaccagggaagcccataaaattcaatgcacttttg
acgacatatgaagtagttttgaaggataaggccgttctgtccaaaatcaaatggagttac
ctgatggtggatgaggctcataggctaaaaaatagtgaggcacagttgtatacaacactt
tcagaatttagcaccaagaacaagttgtttatcactggtactcctctacagaacagtgtg
gaagaactatgggccttgcttcatttccttgatcctgataagttcaggagcaaagatgaa
tttgttcaaaactataagaatctgagttcttttaatgaaaatgagcttgcaaatcttcac
acagaattgagacctcacatacttcgaagagttatcaaagatgtggagaaatcattacct
cccaaaattgagcgtatccttcgggttgaaatgtctcctcttcagaaacagtattataag
tggattttggaacgtaattttcacaatttgaacaaaggagttcgtgggaatcaggtttct
cttctaaatattgtggtggaattaaagaagtgctgcaaccatcccttcttgtttgaaagt
gctgatcatggctatggtggagactcggggagtagtgataacagtaaactagagagaatt
gtttttagcagcggcaagcttgtcatacttgataagctgcttgttagattgcatgaaacc
aagcatcgggttttgattttctctcagatggttaggatgttggatatactgggagaatat
atgtcacttcgaggatttcaatttcagaggctcgatggcagtacaaaagctgagctgcga
cagcaggcaatggatcatttcaatgcacctggtagtgatgatttttgcttccttctttca
acacgggcaggaggtttgggtatcaaccttgccacagccgacactgttataatatttgat
tctgattggaatcctcaaaatgatctgcaggcaatgagtagagctcacagaattgggcaa
caagaagttgttaacatatatagatttgtgacaagtaaaagtgttgaggaagatattctg
gaacgtgctaagaaaaaaatggttctggaccacttggtgattcaaaaattgaatgcagag
ggtagactggagaagaaagaagccaaaaaaggaggcagttattttgacaaaaatgagctg
tctgcaatcttacgatttggagccgaggagctttttaaggaagaaagaaatgatgaagaa
agcaagaaaagactcttaagtatggatatagatgaaattcttgaaagagcagagaaggtt
gaagagaaggaagctgatggggaacagggaaatgagttattaagtgcctttaaggttgcc
aatttttgcaatgatgaagatgatgggagtttttggagccgatggataaagcctgattct
gtattccaagcagaggaagctcttgctcctcgttctgctagaaatattaaaagctatgca
gaagttgatccatcagaaagaactaataaaagaaaaaagaaggaacctgaaccacctgaa
cgagttcagaaacgtcggaaaccagagtattctgctcctgcagtaccaatgattgaagga
gcatgtgttcaagtgagaagttggtcatatggaaatttatcaaaaagagacgcacttcgt
ttttctcgttcggttatgaaatatggcaatgagagccaggttgacttaattgctgccgag
gtgggtggtgcggttggtgcagctccaactggagcacaggttgaacttttcaatgctctt
attgatggctgtacagaggcagtggaacttggtaatttagatgtgaaggggcctctgctg
gacttttttggtgtccctgtgaaggcaaatgatctacttacccgtgtccagcaacttcaa
cttctggcaaagcgtattgatcgatatgaagatcctattgctcaatttcgtgttctgtca
tatctcaaaccatcaaactggtctaaaggttgtggatggaatcaaattgatgatgctaga
ttgcttcttggcatatatttccatggttttggtaattgggaaaagataagattagatgaa
agacttggcctcacgaaaaaaattgcaccggtagaacttcaacaccatgaaactttctta
ccacgggctccaaatttaaaagaccgtgctaatgcccttttggagcaagaacttgcggtt
cttggtgtgaaaaataccaatagcaaagtcggacggaagccttcaaagaaagagagagat
aatgtcatctcattggtacgtgggcaggagaaaaagaaaaaatcaggttctgttaatgtc
caaatgagaaaggatagatttcagaaaccccagaaggttgaatctatagtaaaggaagag
ggtgaaatgtctgacaacgaggaagtatatgaacagtttaaggaggtgaaatggatggaa
tggtgtcaagatgtaatggttgaagaaatgaagacattgaaacgtcttcacaggttgcag
caaactagtgccaatcttcccaaggagaaggtgctttcaaaaatacgcaactatttgcaa
cttcttgggcgaaggatagatcaaattgtgttggaacatgaagaggagccctataagcaa
gatagaatgacagtgcgactgtggaaatacgtctccactttttcccatctttcaggggaa
cggcttcatcaaatatattccaaacttagacaggagcaagatgaggcaggtgttggcccc
tctcacggcaatggatcagtatctgcttcatttaccagaaatgggaacctattccgtcgc
catatggagaggcaaagaggattaaaaaatatgagtacctatcaaacgccagaaccagtt
gataatagtggaaaatctgaggcatggaagcgaagaagaagagctgaaagtgataatcaa
ttccagggtcagccgccagctcaaaggagcggaagtaatggagtccggataactgatcct
aactcactcgggatccttggtgctgggccgtcggacaaacggtttggtaatgagaaacct
tacaggacacaacctggtgggtttccttcaagacaaggcttctcttcaggtataaagtaa
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integrated database retrieval system
