KEGG   Vitis vinifera (wine grape): 100240976
Entry
100240976         CDS       T01084                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03082  ATP-dependent chromatin remodeling
vvi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100240976
   03083 Polycomb repressive complex
    100240976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vvi03036]
    100240976
Enzymes [BR:vvi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     100240976
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     100240976
   HDAC complexes
    Sin3A-HDAC complex
     100240976
    BRAF-HDAC complex
     100240976
    REST complex
     100240976
    SHIP complex
     100240976
    MiDAC complex
     100240976
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     100240976
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100240976
  Chromatin remodeling factors
   NuRD complex
    100240976
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 100240976
NCBI-ProteinID: XP_002266492
UniProt: D7SM47
LinkDB
Position
15:complement(join(13344058..13344143,13344249..13344315,13347556..13347654,13347917..13347987,13349735..13349825,13349928..13349977,13350185..13350293,13350405..13350497,13361744..13361807,13362374..13362593,13362665..13362739,13363547..13363664,13363756..13363868,13364133..13364169))
AA seq 430 aa
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDKFFPGTGDVKETGEREGKFYAINVPLKDGIDDTSFTRLFKT
IIAKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENEYIKYFAPEYSLKIPNGHIENLNSKSYIGTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTRDRQIQRNDEYYEGD
NDNDQNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctctaaggacaggatctcctacttctacgacggtgatgtgggaagtgtgtacttt
gggcccaaccatccgatgaagccgcaccggctttgtatgactcaccatctcgtactctct
tacgaacttcacaagaagatggaaatctataggcctcacaaggcatatccagttgagctt
gcgcagtttcattctgcagactatgtcgaatttctgcatcggataacccctgacacacaa
catttattctcgaatgaattggcaagatataatcttggagaagactgccctgtcttcgaa
aatttatttgagttttgtcaaatttatgctggtggaacaatagatgctgcacgcagatta
aacaatcagctttgtgacatagctataaattgggctggtggattgcaccatgcgaagaag
tgcgaggcatctggattttgttacatcaatgacttagttttggggattttggagcttcta
aaacatcatgcccgtgttctttatattgatattgatgtacatcatggtgatggtgtagaa
gaagccttttatttcacagacagggtgatgactgttagttttcacaagtatggggataaa
ttctttcctggaacgggtgatgttaaggaaacaggagaaagagaaggaaaattttatgcc
ataaatgtcccactcaaggatggaatagatgacactagctttactcgacttttcaaaact
attatagccaaggttgttgaaacttatcaaccaggtgtgatagttcttcaatgtggagca
gattctctggctggggaccgcttgggctgcttcaacctctccattgatgggcatgctgaa
tgtgttaggtttgtgaagaaattcaatttgcccttactggttaccggtggtggtggatac
acaaaagagaatgttgctcgatgttggactgttgaaacaggagttcttttagatacagaa
cttcccaatgagatcccagaaaatgaatatatcaaatattttgcaccagagtattcattg
aagattccgaatgggcacatagaaaacttaaatagcaaatcgtatattggaacgattaag
atgcaagtcttggaaaatctccgttgcatccaacatgcgccgagcgtacagatgcaagag
gttccaccggacttctatattcctgattttgatgaagatgagcagaatcctgatgaacgt
gttgatcagcacacccgggacagacaaatccagagaaatgatgaatattatgaaggcgac
aacgacaatgatcagaatatggatgatgtataa

DBGET integrated database retrieval system