Vitis vinifera (wine grape): 100242521
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Entry
100242521 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC100242521 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
100242521
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
100242521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_9
TPR_12
TPR_14
TPR_11
TPR_19
TPR_10
Coatomer_E
TPR_16
HAGH_C
ANAPC3
Motif
Other DBs
NCBI-GeneID:
100242521
NCBI-ProteinID:
XP_002277910
UniProt:
F6I4S9
LinkDB
All DBs
Position
14:join(946249..946293,946930..947019,947434..947631,947730..947854,948120..948241,948359..948441,956039..956200,956797..956916,957796..957978,958299..958393,958497..958594,958709..958812)
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AA seq
474 aa
AA seq
DB search
MATRFPSKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKL
SSSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRK
FKEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRAT
ARKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQK
VGKSVVEVNADTQGVRSISSSSQGAGEAAIQDRFMVPANTSTSMEETENKGTGNRSKENG
YLENAVQNSGLEDVMSNHKTGQREMKSSLQELASRAASRAMVEAAKNITAPNSAYQFEVS
WRGLLGDHALQASYLKAISPNALPQIFKNALSAPILIDIIKCIATFFVTEMDLAVKFLDN
LTKISRFDMIIMCLSSTDKTDLLKIWDEVFCNKATPSGYADTLGKLRPRYCFKQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaggtttccgagcaagcacgcccgtgatcaagctctggatttccaaggattt
ttgactgacttgcaagattgggaactttctctcaaggagaaagacaagaaaatgaaagcg
caggctgaggaaaaggatgtccctacagcaagaggaaatgtgaagcactctagtaaactt
tctagcagtcctggagttagcttgagactaggccaatcaagaagtgacacaagacaacac
gagtactctagaaatcatgatgccattagccgtatatcaagtagtttcatgactgaagag
agcttgcctgatgctgcttctgagaaagaactgggcaacgagtattttaagcagaggaaa
tttaaggaagcaattgactgctactcaagaagtattgccttattaccaacagctgtggct
tatgcaaatagggcaatggcctatatcaaaatcaagagattccgagaagctgaagatgac
tgtatggaggccttaaatttagatgatcgctacataaaggcgtactcacgccgagcaaca
gccagaaaagaacttgggaaatttaaagaagccactgaggatgctgagtttgccctgcgg
ttggaacctcagaaccaagaaatcaagaaacagtatgctgaggccaaatctttgtatgag
aaggagattcttcagaaggcatctggagcactgaaaagctctgtacaaggactgcagaaa
gtgggaaagtcagtggtggaagtgaatgcagacactcagggagtacgttccatctcaagt
agttctcaaggggcaggagaggctgcaattcaagatcgtttcatggtcccagcaaacaca
tccacatccatggaggaaacggaaaataagggaactggaaacagaagtaaagagaatggt
tatcttgaaaatgctgttcagaattctggtttggaagatgttatgagtaatcacaaaaca
ggccagcgagagatgaagtcatcattacaagagcttgcttctcgggcagcttctcgagct
atggttgaagctgcaaaaaatatcacagcaccaaattcagcatatcaatttgaggtttct
tggcgagggcttttgggtgatcatgccctacaggcttcctatttgaaggccatatcacca
aatgcattaccgcagatattcaagaatgcgttgtctgctcctatactaattgacattata
aagtgcattgccacctttttcgtcacagaaatggacctggccgtcaaatttttagacaat
ttaaccaaaatttcaagatttgacatgatcatcatgtgtctttcatctacagataaaacc
gatctactcaagatatgggatgaagtgttctgtaacaaggcaactccatctgggtatgca
gacacacttggcaaactgcgtccaaggtactgcttcaaacagtga
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