| Entry |
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| Name |
(RefSeq) nuclear pore complex protein NUP98A
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| KO |
| K14297 | nuclear pore complex protein Nup98-Nup96 |
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| Organism |
vvi Vitis vinifera (wine grape)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100249633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:vvi03019]
100249633
03036 Chromosome and associated proteins [BR:vvi03036]
100249633
Messenger RNA biogenesis [BR:vvi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100249633
Chromosome and associated proteins [BR:vvi03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100249633
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(join(2475345..2476036,2476965..2477015,2479399..2479576,2479678..2479794,2479991..2480129,2480432..2480492,2480612..2480699,2481350..2482002,2482084..2482311,2482478..2483092,2494793..2495095,2495983..2496001))
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| AA seq |
1047 aa
MFGSSNPFGQSSSSPFGSQSVFGQTNNATTNPFAPKPFGSTTPFGAQTGGSIFGGTSTGV
FGATQSSSPLPSTATFGASSSPAFGSSVPAFGASSTPAFGSSSSSFGGSSVFGQKPGFGG
FGSTPTQTSPFGSAFQQSQPAFGSSLFGSSTPFGASQAAFGASSTPAFAATSTPAFGATS
TPAFGATSTTPAFGATSTPAFGATGTSAFGSTPSPTFGSTGSAFGGSGAPVFASSGAFGA
SSTPVFGSSTTSAFGTSSTPAFGASSTPAFGASSTPSFSFGSTPAFGQSTAAFGSSPFGT
ATSPFGAQSSPFGAQATTPTFGGTGFGQSAFGGQRGGSRVAAYTPTTEVDSGSGTQPVGK
LESISAMPVYKDKSHEELRWEDYQLGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFG
QSSANPFSSSTSSNPFAPRTPAFGSSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSI
FGASSTPPFGASSSPSLFGASSSSGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLF
QSSTPSLGQTASAFGQSTSAFGQSTTPSFGQSSIFNTPSTGFGGNLFSSAPPLLSTSNPV
GFGQTTPSLSTPFQPAQPAQTIGAFGFSNFGQTQAAGASGFGGGSNIFGSNAFGQSSAAQ
NSVVVQPAPAANPFGTLPAMPQMSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSRH
LSQRRIRLPARKYHPKNDAPKVPFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWSL
RSNAEKTSPLKEASKPVHENGKVSEEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPN
GVHDDHSIQKGDSYITLTGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKE
RAEPGFCRRVKDFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVG
QGLNKPAEVTLLNIKCFDKKTGVQYTEGPKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWK
FRVNHFSKYELGDEEIDDWDMHAVLYC |
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| NT seq |
3144 nt +upstreamnt +downstreamnt
atgtttggttctagtaacccatttgggcagtcatccagtagcccatttgggtctcaatca
gtttttgggcagaccaataatgctactaccaatccttttgcccctaaaccctttggtagt
acaaccccttttggcgcacagactgggggttccatatttggtggcacttcaactggtgtg
tttggtgcaacccaatcttcttccccattgccttccacagcaacatttggcgcttcttca
tcaccggcttttggaagttcagtgcctgcttttggagcttcttcaactcctgcttttggt
agttcatcatcatcatttggcggatcttctgtatttgggcagaagcctggttttggaggt
tttgggtccactcctactcaaacaagtccttttggaagtgcttttcaacagtcgcaacca
gcattcggaagcagtctatttggttcctctacgccttttggtgcaagtcaagctgcattc
ggtgctagtagcaccccagcctttgctgccacaagcacaccagcatttggtgctaccagc
acaccagcgtttggtgctactagtactacgcccgcatttggtgctacaagcacccctgcc
ttcggtgctacaggcacttctgcctttggttcaacaccaagtccaacatttggtagcaca
ggcagtgcatttggtggttcaggcgccccagtctttgcatctagtggagcatttggcgct
tcaagcacccctgtttttggatcatcaactacatctgcatttggtacctcaagcactcca
gcatttggtgcttcaagcacccctgcctttggtgcttctagtaccccatctttcagtttt
gggtcaactccagcatttggccaatcaactgctgcatttggtagcagcccctttggaaca
gctacttctccttttggagctcaaagctctccatttggagcccaggccacaacgccaaca
tttgggggcactggttttgggcagtcagcttttgggggtcaacgtggcggaagtagagta
gctgcttacacaccaactactgaagtagatagtggcagtggtacgcagcctgtgggaaag
ctggagtcaatatctgccatgcctgtctacaaagataaaagccatgaagagctgaggtgg
gaagactaccagttgggggacaaaggtggaccagctcctgctagtcagtctacaggtggg
gttggctttggtgcatccaacacacagtcaaatccttttgctgcttcaccagcatttggt
cagtcatctgctaatcctttttcctcctcaacatcttcaaatccatttgctccaaggact
ccagcctttggcagttctggctttggaggctcatccactcctgcattcagttcatccccc
tttggtgcttcatccacatccaacccttttggatcaacttcatctgcaacaccttctata
tttggagcatcatcaacccctccatttggagccagttcttctccgtctctttttggagca
tcaagctcatcaggctttgggtcatcaccttcaatttttggttccactccagctcaggga
acagctccagcatttggttctggcttaaattttggtaacactcaatcatcaccattgttc
cagtcttcaacaccttctcttgggcagacggcttctgcttttggacaatctacctcggca
tttggacagagcactaccccttcctttggtcaatcaagcatattcaacacaccttcgact
gggtttgggggaaacttgttttcaagtgctccaccactactctctacaagcaaccctgtg
ggtttcggtcaaacaactccctctctttcaacaccatttcaacctgctcaacctgctcag
acaattggtgcttttggctttagcaacttcggtcagacacaagcagctggtgcaagtggc
tttggtggggggtcaaacatttttggttcaaatgcctttggacaatcatctgctgctcaa
aactctgtagttgtgcaacctgctcctgcagcaaatccttttggaactctacctgcaatg
cctcaaatgtcgattggtcgcactggaactgcaccttctattcaatatgggatttctagc
atgcctgttgttgacaagcctgctcctgttagaatatcatccttattgacttctcgacac
ctctctcaaaggcggattaggttgcctgcaaggaaatatcatcctaaaaatgatgctcca
aaggtgccatttttcagtgatgatgaagaaacacctagtacaccaaaggcagatgctctc
tttgtacccagggagaatccaagatctcttgtcattcgcccaatggaacagtggtctttg
agatctaatgcagaaaaaacatctccattgaaggaggcatctaaaccagtacatgagaat
ggtaaagtgtctgaagaaggattaaatggctccaatgctggtgataaggatgcaaatctt
gttgaaaatggccttgccaaggagcgaattcataccatgaagcccaaccagaaacctaat
ggagtacatgatgatcattccatacaaaaaggtgactcgtatatcactcttactgggcac
agagctggtgaggcagccattgtgtatgaacatggggctgacattgaagcactaatgcca
aagcttcgacgctctgattactacacggagcctcggatccaagaattggcagccaaggaa
agggctgaacctgggttctgccgccgtgttaaggactttgtggttggaaggcatggctat
ggcagcataaaattcatgggggagacagatgtgcggcggcttgatcttgagtcccttgtc
cagttcaacaatcgagaagtgattgtttatatggatgacagcaagaaacctcctgttgga
caaggcctcaacaagcctgctgaggtgacccttctaaacataaaatgctttgacaaaaag
accggagttcagtatacagaagggccaaaaattggtaaatacaaggagatgctgaagagg
aaggctgaggaccaaggtgctgagtttgtgtcctatgatcccatgaaaggagaatggaag
ttcagggtcaaccatttcagtaaatacgagcttggagatgaagagatagatgactgggat
atgcatgctgtcctgtattgctga |
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