Vitis vinifera (wine grape): 100250759
Help
Entry
100250759 CDS
T01084
Name
(RefSeq) ubiquitin domain-containing protein DSK2b isoform X4
KO
K04523
ubiquilin
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100250759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100250759
03051 Proteasome [BR:
vvi03051
]
100250759
Membrane trafficking [BR:
vvi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
100250759
Proteasome [BR:
vvi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100250759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
Ubiquitin_2
TBK1_ULD
XPC-binding
Dsc3_N
Rad60-SLD_2
Complex1_LYR_2
Motif
Other DBs
NCBI-GeneID:
100250759
NCBI-ProteinID:
XP_010649310
LinkDB
All DBs
Position
4:join(22697065..22697296,22700747..22701535,22704064..22704278,22704358..22704471,22704803..22704861,22706323..22706351,22707904..22707996,22708081..22708229)
Genome browser
AA seq
559 aa
AA seq
DB search
MGGDGVAGDASESNAGGGVTVHVRCSNGSKFSVQISLESTVRAFKAVLSQNCDIPAEQQR
LIYKGRILKDDQTLESYGLEADHTVHLVRGFAPPAPADKAGPADSGRPNTTPPSIPMDAG
LNEGGALGGSGFGASLFPGLGINGLGGTGGLFGAGLPEFEQMQQQLTQNPSMMREIMNMP
VVQNLMNNPDIMHNLIMSNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMMR
NTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMSGDSGSDLGSNPFAALLGTQGGVQ
AHDRSANPPTAGSDTTNNSPAPNTNPLPNPWTPGGGGGGGAGGAQTNTTTRSNPVGDART
PTPSGLGGLGLPELESMFGSMPDTNSLNQIMQNPAISQMMQSLLSSPQYMNQILGLNPQL
RSVLDSNPQLREMMQNPEFLRQLTSPETMQQFLTLQQSLLSQLGRQQSSQESGQTGGGTG
GMLNNMGLEMLMNMFGGLGAGSMNIPSRSDVPPEQLYATQLSQLQEMGFFDTQENIRALT
ATAGNVHAAVERLLGNPGQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgatggagttgccggcgatgctagcgaatcgaacgccggcggtggagtcacc
gttcacgtccgatgctccaacggttcgaagttctctgtgcagattagcctcgaatcgacc
gtcagagcattcaaagccgttctctcgcagaactgcgatattcccgcggagcagcagcga
ttgatttacaagggacggatcttgaaggacgaccaaaccctagagagctacggcctggag
gcagatcacactgtccacttggttcgtggttttgccccacctgcaccagctgacaaggct
ggtccagccgattcagggcgtccaaatactactcctccaagtattcctatggatgctggt
ttgaatgaaggtggggcattaggaggttctggttttggagcttccctctttcctgggctt
ggtatcaatggtttaggtggcactggaggtttatttggggctggacttccagagtttgag
caaatgcagcaacagttgactcaaaaccccagcatgatgagagaaataatgaacatgcct
gttgttcagaacttgatgaataatcccgacataatgcataacttaattatgagcaatcct
caaatgcgtgaaataattgatcgaaatcctgagctagcacacatacttaatgatcctagt
actctccgtcagaccttagaagctgcaagaaaccctgaactcatgcgtgagatgatgcgt
aatactgacagagcaatgagcaacattgaatcatcccctgagggattcaacatgctcagg
cgcatgtatgaaactgttcaagagccatttctgaatgcaactacaatgtctggggacagt
ggaagtgatttaggatcgaacccttttgcagctcttttagggacccaaggtggggttcag
gcccatgatcgatctgctaatcctccaaccgctggttctgatacaacaaataattctcct
gctccaaatacaaaccctcttcccaacccttggaccccaggtggtggtggtggtggtggt
gctggaggtgcccaaacaaacaccactacaaggtcaaatcctgtgggtgatgctaggact
ccaacacccagtggattgggtggacttggtctcccagagcttgagagcatgtttggctcc
atgccagatactaattcactgaatcagattatgcaaaatcctgctatatcacagatgatg
cagagcctcctttccagtcctcagtatatgaaccagatacttggtctcaatccccagttg
cgtagcgttcttgattccaatcctcaactaagagaaatgatgcaaaatccagaatttctt
cgtcagttgacttcaccagagacaatgcagcaatttttgactttacagcaatctcttctg
tctcagcttggtcgccaacaatcaagccaggaatcaggtcagactggtggtggcacagga
ggaatgcttaacaatatggggttagagatgttgatgaacatgtttggtggactcggggct
ggcagtatgaatattcccagcagatctgatgtaccaccggaacaattgtatgctactcag
ctgtcgcagcttcaagaaatgggtttctttgacacacaggagaatatacgggctctgact
gccactgcagggaatgtccatgctgcagtggagcggctattggggaaccctggtcagtag
DBGET
integrated database retrieval system
