Vitis vinifera (wine grape): 100251082
Help
Entry
100251082 CDS
T01084
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100251082
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100251082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100251082
NCBI-ProteinID:
XP_002265100
UniProt:
D7U3E6
LinkDB
All DBs
Position
7:complement(join(9882872..9883093,9883219..9883357,9883455..9883558,9883668..9884310,9886314..9886394,9887120..9887176,9887519..9887610))
Genome browser
AA seq
445 aa
AA seq
DB search
MAVSLRWFSLCSLLVLVLFLRVNADELQKLRVEEKPDQLQSLENSTMAERLDKSEGWNER
NEHAVENPEEVASMVDMSIRNSTERRNLGYFSCGTGNPIDDCWRCDPHWQLHRKRLADCG
IGFGRNAIGGRDGRYYVVTDPGDYDAVNPRPGTLRHAVIQDKPLWIVFKRDMVIKLKQEL
IMNSFKTIDARGVNVHIANGACITIQFITNVIIHGLNIHDCKPTGNAMVRSSPSHYGWRT
MADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMGSTAITISNNYFTHHNEVMLLGHSDS
YTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGN
RYLAPANPFAKEVTKRVITSNSVWKHWNWRSEGDLLLNGAYFTPSGAGAAASYARASSLG
AKSSSMVGTITSGAGALSCRRGRQC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctctgaggtggttctcgctttgctcgttgttggtgttggtgctgttcctc
cgcgtcaacgccgacgagcttcagaaattgagggttgaagaaaagccggaccagttgcag
agcttggagaactccacaatggcggagaggttggataaaagtgaagggtggaatgagcgg
aatgagcacgccgtggaaaatccagaggaggttgcttccatggttgatatgagcatccgt
aatagtacggaaaggaggaacctgggttatttctcatgtggaactggaaatcccattgat
gactgctggcgctgtgacccacattggcaacttcaccgcaagcgccttgctgactgtggc
attggctttggacgcaatgccattggtggccgggatggacggtactatgtggtgacagac
cctggtgattacgacgctgtcaatccccgacctggcactcttcgccatgctgtcatccag
gacaagcctttatggatcgtgttcaagcgggacatggtgattaaactgaagcaagagctg
atcatgaacagtttcaagacaattgatgctcgtggagtgaatgtccacatcgccaatggg
gcgtgcatcaccatccagtttatcaccaatgtcattatccatggtctcaatattcatgat
tgcaagcccactggcaacgccatggtccgaagctcacctagccattatggatggaggaca
atggccgatggtgatggcatttcaatttttggctccagccacatctggattgatcacaac
tccctctccaactgcgccgatggccttattgacgctgtgatgggatccactgccattacc
atctccaacaactacttcacccaccacaatgaggtgatgctattgggtcacagtgactct
tacacaagagacaagcagatgcaagtgaccattgcttacaaccatttcggcgagggactt
atccagagaatgccaaggtgtaggcatggttatttccatgtggtaaacaacgactatacc
cactgggaaatgtatgctattggtggaagtgctgagcccaccattaacagccagggcaac
agatatcttgcccctgccaacccctttgctaaagaggtgacaaagagggtgatcacctct
aacagtgtgtggaagcactggaattggagatcagagggagaccttttgctaaatggggcc
tacttcactccatccggagctggggctgcagccagctacgccagagcttcaagcttagga
gccaagtcctcttccatggtgggcaccatcacatccggtgccggtgctctctcctgccgc
agaggccgccaatgctga
DBGET
integrated database retrieval system
