KEGG   Vitis vinifera (wine grape): 100252349
Entry
100252349         CDS       T01084                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi03083  Polycomb repressive complex
vvi04120  Ubiquitin mediated proteolysis
vvi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100252349
   04120 Ubiquitin mediated proteolysis
    100252349
  09126 Chromosome
   03083 Polycomb repressive complex
    100252349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100252349
   04121 Ubiquitin system [BR:vvi04121]
    100252349
   03036 Chromosome and associated proteins [BR:vvi03036]
    100252349
Membrane trafficking [BR:vvi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    100252349
Ubiquitin system [BR:vvi04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     100252349
   Cul7 complex
     100252349
Chromosome and associated proteins [BR:vvi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     100252349
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     100252349
SSDB
Motif
Pfam: Skp1 Skp1_POZ Methyltransf_16
Other DBs
NCBI-GeneID: 100252349
NCBI-ProteinID: XP_002270061
UniProt: A5BBC4
LinkDB
Position
18:join(12836524..12836820,12839955..12840128)
AA seq 156 aa
MSSSRKITLKSSDGEAFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC
KKHVEAPKPEERSGVDEELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM
IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgaggaagatcactctgaagagctccgacggcgaggctttcgacgtcgat
gaagccgtagcattggaatcgcagacgatcaagcacatgatcgaggacgactgcgcggac
aacggcattccgttgccgaacgtcaccagcaagatcttgtcgaaggtgatcgaatactgc
aaaaagcacgtggaagcgccgaagcccgaggagcgtagtggcgtcgatgaggaactcaag
gcttgggatgctgattttgttaaagttgatcaggccaccctatttgatctcattctggca
gcaaactatctgaacatcaagagtctcctggatcttacttgtcagactgtggctgacatg
ataaagggcaagactccagaggagattcgcaaaactttcaatatcaaaaatgattttaca
ccggaggaagaggaggaggtgcggcgggagaaccagtgggcctttgagtga

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