Vitis vinifera (wine grape): 100253708
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Entry
100253708 CDS
T01084
Name
(RefSeq) protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5
KO
K12199
vacuolar protein sorting-associated protein VTA1
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100253708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100253708
Membrane trafficking [BR:
vvi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100253708
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vta1
Vta1_C
Motif
Other DBs
NCBI-GeneID:
100253708
NCBI-ProteinID:
XP_002277187
UniProt:
F6HET5
LinkDB
All DBs
Position
19:join(7302962..7303055,7303177..7303277,7303936..7304045,7312638..7312713,7312900..7313040,7313331..7314089)
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AA seq
426 aa
AA seq
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MASENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQGERTKTTNSLLISLM
KQLEKDKKALKLGPDDHLHLEGFASNVFARADKQDRAGRADLNTAKTFYAASIFFEILNQ
FGELQPDLEQKQKYAAWKAADIRKALKEGRKPQPGPPVDENDLSLPTSTTSGAYDLGPSQ
TGPSFNPGPESDPSPQFNGSLSRQHSLNITPSPPPTNITPSPPPTNITPSPPPTSFPPLP
PNVPPPPSYRSADYPSHDFHPPPPTNRSENSSYPQPYHPQPYPQEPQQQLPQNCPSHETP
SSYSYPNFQSYPSFTESSLPAAPSHYPSYYQGSDASYSPQSAPVSSYPSAAQYNSSGGNE
AISEPAPSSSQTYQYDSNYQPPAEKIAEAHKAARFAVGALAFDDVSVAVDFLKKSLELLT
KPSAGQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgaaaacgagcctgccaaactccttctaccctaccttcaacgcgccgatgag
ttgcagaaacacgaacccctcgtcgcctactactgtcgattatatgcgatggaaagaggg
ctgaaaattcctcaaggcgagcgtaccaagaccaccaactccctcctcatttccctcatg
aaacagctagaaaaggataagaaggcattgaaattggggcctgacgaccacttgcacttg
gaaggatttgcctcaaatgtttttgcaagagcagacaagcaggatcgagctggacgagca
gatttgaatactgcaaaaaccttctatgctgcaagcattttctttgagattcttaatcag
tttggtgaacttcagcctgatcttgaacagaaacagaagtatgcagcatggaaagcagct
gatattaggaaagctttgaaagagggaaggaaaccccaaccaggccctcctgttgatgaa
aatgatctatcactaccaacaagtaccacaagtggtgcatatgatcttgggcctagccaa
actggtccatctttcaatccaggaccagaatctgatccatcacctcaatttaatggtagt
ctgagccgccagcattccttaaatattacaccatcacctccccctacaaatattacacca
tcacccccccctacaaatattacaccatcgcctcctcctacaagttttccaccattgcct
ccaaatgttccaccacctccctcttaccgtagtgctgattatccttcccatgattttcat
ccaccacctccgactaacagatctgaaaattctagttatcctcagccataccaccctcaa
ccctacccacaagaaccacagcagcaattgccacaaaattgtccttctcatgaaacaccc
tcatcttattcttatcctaatttccagtcttacccgagcttcactgagagcagccttcca
gccgccccatctcattatccttcttattatcaaggctcggatgcttcatactccccccag
tcagctcctgtttcaagttatccatcagctgctcaatacaattcaagcggcggaaatgag
gccatttcagagcctgcaccaagttcttcccaaacatatcaatatgacagcaattaccag
ccaccagcagagaaaattgctgaggcacacaaggctgcaaggtttgcggttggggctttg
gcatttgatgatgtatcagttgcagtggacttccttaaaaaatcccttgaattgctgaca
aaaccatctgcaggccagtaa
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