Vitis vinifera (wine grape): 100266027
Help
Entry
100266027 CDS
T01084
Name
(RefSeq) CSC1-like protein HYP1 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vvi02000
]
100266027
Transporters [BR:
vvi02000
]
Other transporters
Pores ion channels [TC:
1
]
100266027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
100266027
NCBI-ProteinID:
XP_002269926
UniProt:
F6I1U2
LinkDB
All DBs
Position
3:join(13268048..13268328,13279029..13279184,13283706..13283769,13284043..13284252,13292561..13292752,13311011..13311309,13324573..13324849,13325304..13325579,13326219..13326452,13327788..13327946)
Genome browser
AA seq
715 aa
AA seq
DB search
MLVSSLLTSLGINLGLCILFFMLYSILKKQPGNFEVYAPRLLAEGKSKKISHFNLERLLP
SPGWVRRAWQPSEEELLSSSGLDTVVFMRIFIFSFRVFLVAGILGIFVLLPVNCVGDQLK
SIDFSDFSNNSLDLFTISNVKNGSKWLWLHFCSVYIVTVWVCYLLYYEYKYISLKRIAYF
YSSKPQPHQFTILVHSIPVSAGSSVGDTVENFFTEYYPSTYLSNVVVRRTNRLRGLINDA
KKLYKKLDRLQSEPNQPKLKRGCCFGLFGEKVDLVDQYEKKLEGLEENVRLEQSEVSLAG
EDVRAAFVSFKSRYDAAIAFHLQQSINPTQWVAEQAPEPHDVYWPFFSSSFMRRWISKLL
VIVAFILLTILFLIPVVIVQGLTNLNQLETWLPFLKSILTLTIVSEVITGYLPSLILQLF
LKAVPPIMEFFSSIQGYMALSDIEKSACNKVLWFTIWNVFFANVLSGSALYLINIILDPK
NIPAKLAVAVPAQASFFIAYVVTSGWTGVSSELFRVIPFICSLIRKPFVKSEDDDIEVPS
IPYHKEIPKILFFGLLGITYFFLAPLILPFLLVYLCLGYIIFRNQFLNVYAPKYETAGKF
WPIVHNSMIFSLVLMHAIAIGIFTVKKLSIASTLIFPLPVLTLLFNEYCRKRFLPIFIAY
SAESLIKRDRQDQNEPSMDEFFHELVTAYQDPALAPIQYSSNRDSLTSPLISSEV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtcttctcttctaacgtctctgggaatcaatctcggcctgtgtattttattc
tttatgttgtattctatactgaagaaacagccaggtaattttgaagtttatgcgccacgc
ttgctggctgaaggaaagtctaaaaagataagccatttcaacctagagaggctcttacct
tctcctggttgggtgagaagggcatggcagccttcagaggaggaattattatcatcctca
ggcttggatacagtggtttttatgcgcattttcatctttagtttcagagtatttctggtt
gctgggattttagggatctttgttcttcttccagtgaattgcgtgggagatcagcttaag
tccatagacttttctgatttttcaaataactcgttggacttatttaccatttcaaatgta
aagaatggctcaaaatggttatggcttcacttctgctctgtatatattgtcactgtatgg
gtctgttatcttctttactatgaatataaatatatttctttgaaaaggatcgcttacttt
tattcatccaagccacagccacatcagtttactatcttagttcacagtatccctgtttct
gctgggagcagtgttggtgacacagttgaaaatttttttaccgagtattatccttctaca
tatctatcaaatgtggtggttcgtcgaacaaaccgacttcggggtcttattaatgatgca
aagaaattgtataaaaaacttgatcgcttacaatcagagcctaatcaaccaaagcttaag
cgaggttgctgttttgggctgtttggcgagaaggttgatcttgtggatcaatatgaaaag
aagctagaaggtctagaggagaatgtaagattggagcagtcagaggtttcattggcaggg
gaagatgttcgagctgcctttgtgtccttcaagtctcgttatgatgctgcaattgctttt
cacttgcaacaatcaatcaatcctacacagtgggtcgcagagcaagctccagaacctcat
gatgtttactggcctttcttttcttcatcattcatgcgacgatggatttctaaactgctg
gtcatagttgcatttattcttcttacaattttatttcttattcctgttgtcattgtgcaa
ggtcttaccaacctgaatcagttggaaacttggcttcccttcttgaaaagcattttaacc
ctaactattgtcagtgaagtaatcacaggataccttcccagcttgatacttcagctgttc
ctgaaagcagtgcctccaataatggagttcttttcttccattcaaggatacatggccctt
agtgacatagaaaaaagtgcatgcaacaaagtactttggttcacaatttggaatgttttt
tttgcaaacgtgctttctggatcagctttatatctaattaacatcattcttgatcctaag
aatattccagcaaagctagctgttgctgtccctgcacaggcatcgtttttcattgcttac
gtcgtcacatcaggatggacgggcgtttcatcggaactctttcgtgtaatcccttttatt
tgcagcttaataagaaaaccttttgtgaaaagtgaagatgatgacattgaagttccatct
attccctaccacaaggaaattccaaaaatccttttctttggtcttcttggtataacatat
ttcttcctggctccactgattctgcccttccttttggtgtacctatgtcttggatacatc
atattccgtaatcagttcttaaatgtgtatgctcccaagtatgaaactgcagggaagttt
tggcctattgtccacaattcaatgatattttctttggtactgatgcatgccattgcaatt
ggaatctttacagtgaagaagctctccatagcgtcaactttaatatttccacttccagtc
ctcacacttctctttaatgagtattgtcggaaacggttccttcccatttttattgcttac
tcagctgagagtttgataaagagggacagacaagaccagaatgagccttcaatggatgaa
tttttccatgaactggttactgcttatcaggatcctgctctcgcaccaattcaatactct
tcaaatagggacagccttaccagtccccttatctcttctgaagtttga
DBGET
integrated database retrieval system
