Vitis vinifera (wine grape): 100854719
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Entry
100854719 CDS
T01084
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
KO
K14963
COMPASS component SWD3
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100854719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vvi03036
]
100854719
Chromosome and associated proteins [BR:
vvi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
ATAC complex
100854719
NSL complex
100854719
HMT complexes
COMPASS/SET1 complex
100854719
COMPASS/SET1 complex (yeast)
100854719
MLL-HCF complex
100854719
MLL3/MLL4 complex
100854719
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100854719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
eIF2A
WD40_like
PROPPIN
RMC1_N
PALB2_WD40
DUF5888
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
100854719
NCBI-ProteinID:
XP_003632482
UniProt:
D7SSH8
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All DBs
Position
7:join(25334812..25335459,25340745..25341038)
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AA seq
313 aa
AA seq
DB search
MASDPSEFITPYKLKQTLTAHKRAVSAVKFSSDGLLLGSSSADKTLRTWSTSGDFSTLQE
FHGHDQGISDLAFSSDSRHVCSASDDKTVRLWDVETGSLIKTLQGHTNHVFCVNFNPQSN
MIVSGSFDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDGLCRIWDAST
GHCMKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLRLWNFSTGKFLKTYTGHVNSKYCI
SSTFSVTNGKYIVGGSEDNCVYLWELQTRKIVQKLEGHTDTVISVSCHPSQNMIASGALG
SDKTVKIWTQERD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatccatcagaattcatcaccccctacaagctcaaacaaaccctaacagcc
cacaaacgcgccgtttcagccgtcaagttctcctccgacggcctcctcttgggttcttcc
tccgccgataaaacccttcgcacctggtccacctctggcgacttctctactctccaagaa
ttccatggccacgaccagggcatttcggacctcgccttctcttcggactcccgccacgtc
tgctcagcctccgacgacaagaccgtccgcctctgggacgtcgaaactggctctctcatc
aaaacactacagggccacaccaaccacgttttctgcgttaacttcaacccccagtccaac
atgatcgtctcaggttccttcgatgagaccgttagggtttgggatgtcaagactggcaag
tgcttgaaggtgcttcccgcacattctgatcccgtcactgccgccaatttcaatcgtgat
ggctccctcatcgtttccagtagctatgatggtttgtgcaggatttgggacgcttccact
ggtcattgtatgaagactttgatcgatgatgagaatcctcccgtttctttcgtcaagttc
tcccccaatggcaagtttattcttgtgggcactctcgataacactctgcggctttggaac
ttctcaacagggaagtttctgaagacatacactggccatgtcaattcaaagtattgcatt
tcatcaacattttcggtaacaaatgggaagtatattgttggtggttccgaggataactgt
gtgtacttgtgggaacttcagacgaggaaaatagtgcagaaattggaaggtcacacagac
actgttatatcggtttcatgtcacccctcccaaaatatgattgcatctggtgcactcggc
agcgacaagacagtgaagatttggactcaggagagagattga
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integrated database retrieval system
