Vibrio vulnificus 93U204: VV93_v1c11130
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Entry
VV93_v1c11130 CDS
T03294
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VV93_v1c11130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c11130
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VV93_v1c11130
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VV93_v1c11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AIL70204
LinkDB
All DBs
Position
I:1211496..1213526
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AA seq
676 aa
AA seq
DB search
MSKLYDLVSDYAPSGDQPTAIKQLTEGLDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPEAYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDIAFERGQFRVRGEVIDVFPAELDQDAVRIEMFDDEIDCISVFDPLTGVVKQRDLP
RFTIYPKTHYVTPRERILQAIENIKQELRERQTYLRDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEYGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSAGEIADQVVRPTGLL
DPVLEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQPQALKRNIKDIMEL
GDITKSRKQKVSKTVPLSKVAEPSLSYNVLTPQQLEKEITKLEAQMYKHAQNLEFELAAQ
KRDEIEKLRQQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactttacgatctggtttctgactatgcgccatcgggagatcaaccaacggcg
atcaaacaactgacagaagggttggatgctggcttggctcaccaaaccttacttggggtg
acgggatccggtaaaacatttactttggcgaatgtgattgctcaagcacaacgtcctgca
attctgctcgcgccaaacaaaactcttgccgcccaactttacggcgagatgaaagcgttt
ttccccaataacgcggtcgaatattttgtctcttactacgattattaccaacctgaagcc
tatgtgccaaccaccgacacctttatagagaaggactcatcggtcaacgctcatattgaa
caaatgcgtttatcggccaccaaagcgttattggagcgaaaagacgccattatcgtcgcc
tctgtttcggctatttatggtttgggtgatcccgaggcctacctgcaaatgatgttgcat
atacgccgtggtgatgtgatggatcaacgcgacatactgcgccgtttggctgagctgcaa
tatagccgtaacgatattgcttttgaacgaggccaatttcgagtgcgcggagaggtgatc
gacgtttttccggctgaattggaccaagatgcggtgcgcatcgagatgtttgatgatgag
atcgactgcatcagtgtgtttgatccactgaccggagtggtcaaacaacgcgatttaccc
cgctttactatttaccctaagactcactacgtcacacctcgagagcgtattctgcaggcg
attgaaaacatcaaacaagagctgcgtgagcgacaaacttacttgcgtgacaacaataaa
ttgttggaagagcaacgtattagtcagcgtacccaattcgatattgaaatgatgaatgag
ctgggattctgctctggcatcgaaaactactcgcgttacctcagcggtcgagcggaaggt
gagccgcctccaacgttatttgactacttaccacacgacggtttgttgatcattgatgaa
tctcacgtgacagtgccacaaattggcgcaatgtataaaggtgaccgctcacggaaagag
accttggttgaatatggtttccgtttgccttcagcattggacaatcgaccattgaaattt
gaagagttcgaagcgcttgcgccacaaactattttcgtttcagccactccgggtaattac
gaactagagaaaagtgcgggcgaaattgctgaccaagtggtgcgtccgaccggattgctc
gatcctgtactggaagtgcgaccagtggcgactcaagtggatgatctgctttctgagatc
cgcattcgcgcggtgaaagatgaacgcgtgttagtgacaacactgaccaaacgtatggcg
gaagatctaactgaatacttgcatgagcacgatgtgaaagtgcgttacctacactctgat
atcgacacggttgaacgagtggagatcattcgtgacttgaggctaggggagttcgatgtg
ttggtggggattaacttgttacgcgagggtctcgacatgcctgaagtgtctttggttgcg
attctcgatgctgataaagaaggctttttacgttcagagcgctcattgattcagaccatt
ggccgtgcagcccgtaacctccatggtaaagctatcttgtatgcagactccatcaccaaa
tcgatgaagaaagcgatggatgaaactgaacgacgccgtgagaaacagcaagcgtacaat
gaaaagatgggcattcagcctcaagccttgaagcgtaatatcaaagatattatggagctg
ggcgatattacgaaatcccgcaagcagaaagtgagcaaaacggtgccattgtcgaaagtg
gctgaaccatcgctgtcctataatgtgttgacaccacagcaattggaaaaagaaatcaca
aaactggaagcgcaaatgtacaaacacgctcagaatttggaatttgaattggccgcgcag
aagcgtgatgaaattgaaaagttgcgtcagcagtttattgctaacagctaa
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