Vibrio vulnificus MO6-24/O: VVMO6_02024
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Entry
VVMO6_02024 CDS
T01415
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VVMO6_02024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_02024
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VVMO6_02024
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VVMO6_02024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ADV87046
LinkDB
All DBs
Position
I:complement(2172488..2174518)
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AA seq
676 aa
AA seq
DB search
MSKLYDLVSDYAPSGDQPTAIKQLTEGLDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPEAYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDIAFERGQFRVRGEVIDVFPAESDQDAVRIEMFDDEIDCISVFDPLTGVVKQRDLP
RFTIYPKTHYVTPRERILQAIENIKQELRERQTYLRDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEYGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSAGEIADQVVRPTGLL
DPVLEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQPQALKRNIKDIMEL
GDITKSRKQKVSKTVPLSKVAEPSLSYNVLTPQQLEKEITKLEAQMYKHAQNLEFELAAQ
KRDEIEKLRQQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactttacgatctggtttctgactatgcgccatcgggagatcaaccaacggcg
atcaaacaactgacagaagggttggatgctggcttggctcaccaaaccttacttggggtg
acgggatccggtaaaacatttactttggcgaatgtgattgctcaagcacaacgtcctgca
attctgctcgcgccaaacaaaactcttgccgcccaactttacggcgagatgaaagcgttt
ttccccaataacgcggtcgaatattttgtctcttactacgattattaccaacctgaagcc
tatgtgccaaccaccgacacctttatagagaaggactcatcggtcaacgctcatattgaa
caaatgcgtttatcggccaccaaagcgttattggagcgaaaagacgctattatcgtcgcc
tctgtttcggctatttatggtttgggtgatcccgaggcctacctgcaaatgatgttgcat
atacgccgtggtgatgtgatggatcaacgcgacatactgcgccgtttggctgagctgcaa
tatagccgtaacgatattgcttttgaaagaggccaatttcgcgtgcgcggagaggtgatc
gacgtttttccggctgaatcggaccaagatgcggtgcgcatcgagatgtttgatgatgag
atcgactgcatcagtgtgtttgatccactgaccggagtggtcaaacaacgcgatttaccc
cgctttactatttaccctaagactcactacgtcacacctcgagagcgtattctgcaggcg
attgaaaacatcaaacaagagctgcgtgagcgacaaacttacttgcgtgacaacaataaa
ttgttggaagagcaacgtattagtcagcgtacccaattcgatattgaaatgatgaatgag
ctgggattctgctctggcatcgaaaactactcgcgttacctcagcggtcgagcggaaggt
gagccgcctccaacgttatttgactacttaccacacgacggtttgttgatcattgatgaa
tctcacgtgacagtgccacaaattggcgcaatgtataaaggtgaccgctcacggaaagag
accttggttgaatatggtttccgtttgccttcagcattggacaatcgaccattgaaattt
gaagagttcgaagcgcttgcgccacaaactattttcgtttcagccactccgggtaattac
gaactagagaaaagtgcgggcgaaattgctgaccaagtggtacgtccgaccggattgctc
gatcctgtactggaagtgcgaccagtggcgactcaagtggatgatctgctttctgagatc
cgcattcgcgcagtgaaagatgaacgcgtgttagtgacaacactgaccaaacgtatggcg
gaagatctaactgaatacttgcatgagcacgatgtgaaagtgcgttacctacactctgat
atcgacacggttgaacgagtggagatcattcgtgacttgaggctaggggagttcgatgtg
ttggtggggattaacttgttacgcgagggcctcgacatgcccgaagtgtctttggttgcg
attctcgatgctgataaagaaggctttttacgttcagagcgctcattgattcagaccatt
ggccgtgcagcccgtaacctccatggtaaagcgatcttgtatgcagactccatcaccaaa
tcgatgaagaaagcgatggatgaaacggaacgacgccgtgagaaacagcaagcgtacaat
gaaaagatgggcattcagcctcaagccttgaagcgtaatatcaaagatattatggagctg
ggcgatattacgaaatcccgcaagcagaaagtgagcaaaacggtgccattgtcgaaagta
gctgaaccatcgctgtcctataatgtgttgacaccacagcaattggaaaaagaaatcaca
aaactggaagcgcaaatgtacaaacacgctcagaatttggaatttgagttggccgcgcag
aagcgtgatgaaattgaaaagttgcgtcagcagtttattgctaacagctaa
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