KEGG   Vicia villosa (hairy vetch): 131623223
Entry
131623223         CDS       T09680                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
vvo  Vicia villosa (hairy vetch)
Pathway
vvo03030  DNA replication
vvo03410  Base excision repair
vvo03420  Nucleotide excision repair
vvo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vvo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131623223
   03410 Base excision repair
    131623223
   03420 Nucleotide excision repair
    131623223
   03430 Mismatch repair
    131623223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vvo03032]
    131623223
   03400 DNA repair and recombination proteins [BR:vvo03400]
    131623223
Enzymes [BR:vvo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     131623223
    6.5.1.6  DNA ligase (ATP or NAD+)
     131623223
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     131623223
DNA replication proteins [BR:vvo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    131623223
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     131623223
DNA repair and recombination proteins [BR:vvo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     131623223
   NER (nucleotide excision repair)
    Other NER factors
     131623223
   MMR (mismatch excision repair)
    Other MMR factors
     131623223
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 131623223
NCBI-ProteinID: XP_058750203
LinkDB
Position
Unknown
AA seq 793 aa
MLSSLFKPCFSLPFSTRISVNSSSIIPFNFPFPLSSTPRRAMSKPRPSAFDALMSGARAA
AAKKKPPPPSSSSSPKKRKSPPPSPKPPQSTLSAQNPNTNVKTLETVESVQQPQETVQQP
NETVPEEPPNKIRNTLPSHKDVIAELKERVPQLKKKPSSFDPSEVACWEKDKPVPFLLLC
LAFDMIAAESGRIVMTDIVCNLLRTVIHASPDDLVSVVYLSANRIAPAHVGLELGIGDAS
IIKALAEAYGRTEKQIKNQYKEKGDLGLVAKASRSSQSMMRKPEPLTITKVFNTFHLIAK
ESGKDSQEKKKNHIKSLLVAAIDCEPLYIIRLLQSKLRIGYAEQTLLAALGHAAVYSEEH
SKPPSEVQSPFEEAAKIVKKVYSVLPDYDKIVSALLSHGVWELPTKCDFTPGVPVGPMLS
KATKGVAEILNKFQDVEFTCEYKYDGERAQIHYLENGSVEIYSRNAERNTGKFPDVVAAV
SRLKKTTVSSFILDCELVAYDRAKQRILPFQVLSTRARKNVSVSDIKVEVCIFAFDLLYL
NGQALLQENLKIRREHLYGSFEEETGFFQFATSTTSNDVEEIQKFLDEAIDASCEGLIIK
TLHEDATYEPSKRSLNWLKLKKDYMDNIGDSLDLVPIGAFAGRGKRTGVYGAFLLACYDP
DREEFQSLCKIGTGFTENVLEERSTSLRSKVIPKPKAYYQYGESVKPDVWFEASEVWEVK
AADLTISPIYRAAAGTVDPNKGMSLRFPRLLRVRPDKAPEQASSSEQIAEMYKAQKHNHN
DIQDARQNDDEDV
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgctatcatcgcttttcaaaccgtgtttctctcttccgttttctacccgcatttccgtt
aactcttcttctataatccctttcaatttcccattccctctctcttcaacccctcgccgc
gccatgtcaaaaccccgaccctccgccttcgacgccctcatgtccggcgcacgcgccgcc
gccgccaagaagaaaccccctcccccttcctcatcctcgtctcccaagaaacgaaaatct
cctccgccttcccctaagcctcctcaatccacactctccgctcaaaaccctaataccaac
gtcaaaaccctagaaacagttgaatcagttcaacaacctcaagaaactgttcaacaacct
aatgaaacagttcccgaagaaccaccgaacaagatccgtaacactttaccttctcataaa
gacgtaatcgctgaattgaaggaacgagttccgcagctgaagaagaagccgtcgagtttc
gatccgagtgaggttgcttgctgggagaaagataagcctgtgccgtttttgttactctgt
ttggcgtttgacatgattgccgctgagagtgggaggattgtgatgactgacattgtgtgt
aatctgttgaggactgttatacatgcttctcccgatgatcttgtttcggttgtttattta
tctgcaaacagaatcgcgccggctcatgtagggttggaattgggaattggtgatgcctct
attattaaggcgcttgctgaggcgtatggaaggacggagaagcagatcaagaatcagtat
aaggaaaaaggtgacttgggcttagttgcgaaagctagccgatcgtctcagtctatgatg
cggaagcccgaacctttgactattacaaaggtgttcaacacatttcatcttattgcaaag
gaatctggaaaagacagtcaagagaagaaaaagaatcacataaagtcacttcttgttgct
gcaattgactgtgaacctctatatattatccgtttgctacagtcaaaattgcgaattgga
tatgccgagcaaactctcttagctgcattaggccatgctgcagtgtactctgaagaacat
tctaaaccgccttctgaagttcagtctccttttgaagaggctgctaaaattgttaaaaaa
gtctattccgttcttcccgactatgacaaaattgtgtctgcactgctttcgcatggtgta
tgggagcttccaacgaaatgtgattttactcctggtgttcctgttgggcctatgctgtca
aaagcaaccaaaggtgtagctgaaattctaaataagtttcaggatgtagagtttacatgt
gaatacaaatacgatggagagcgtgctcagatacattacttggagaatggctcagtagag
atttacagtagaaatgctgaacggaacactgggaagtttcctgatgttgttgcagcagtt
tcaaggttaaagaaaacaacagtgtcgtcctttatccttgattgtgaacttgttgcatat
gatcgtgcaaaacagagaatccttcctttccaggtgcttagtactcgggcccgcaaaaat
gtcagcgtgagtgacataaaggttgaagtttgcatatttgcttttgatttgttgtacctc
aatggccaagcacttcttcaagaaaacttgaaaatccgtagagagcatctctacggctct
tttgaggaagagactggattctttcagtttgcgacatcaactacatcaaatgatgtcgag
gagatacaaaaatttcttgacgaagctattgatgcaagttgtgagggattaattattaaa
acattacatgaagacgccacatatgagccctccaagcggtcactcaactggctgaaactg
aagaaagattatatggataatattggggactcattagatttggtacctattggtgctttt
gctggtcgagggaaacgcacaggagtgtatggtgcttttctccttgcatgctatgaccct
gatagggaagaatttcaaagtctttgtaagataggaactggattcacagaaaacgtgctt
gaagaacgttctactagccttcgctctaaagtgattcccaaaccaaaggcatattatcaa
tatggagaatcagtcaaacctgatgtctggtttgaagctagtgaggtgtgggaggtaaaa
gccgcagacctgaccattagccctatttaccgagctgcagcgggcacagtagatcccaat
aagggaatgtctctgcgatttccgcgtctacttcgagttcggcctgacaaagctccggaa
caggcctcctcttctgagcagattgctgaaatgtataaagctcagaagcacaatcacaac
gatattcaggatgccagacagaatgatgatgaagatgtttaa

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