Vulpes vulpes (red fox): 112931262 Help Entry 112931262         CDS       T05911                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism vvp  Vulpes vulpes (red fox) Pathway vvp03030   DNA replication vvp03410   Base excision repair vvp03420   Nucleotide excision repair vvp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:vvp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     112931262 (LIG1)    03410 Base excision repair     112931262 (LIG1)    03420 Nucleotide excision repair     112931262 (LIG1)    03430 Mismatch repair     112931262 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vvp03032]     112931262 (LIG1)    03400 DNA repair and recombination proteins [BR:vvp03400]     112931262 (LIG1) Enzymes [BR:vvp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      112931262 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      112931262 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      112931262 (LIG1) DNA replication proteins [BR:vvp03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     112931262 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      112931262 (LIG1) DNA repair and recombination proteins [BR:vvp03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      112931262 (LIG1)    NER (nucleotide excision repair)     Other NER factors      112931262 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      112931262 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR Presenilin Motif Other DBs NCBI-GeneID:  112931262 NCBI-ProteinID:  XP_025869641 UniProt:  A0A3Q7U8T0 LinkDB All DBs Position Unknown AA seq 913 aa AA seqDB search MQRSIMSFFYPKKEGKVKKPEKETSNSIRETEPPPKVALKERNGEVPESDSPVKRPGRKV ARVLGSEGEEEDEALTPSKAQKPAPGSPQGSPPSPVTYPESSPSLSTTSPVDISAGIPKR RTARKQLPKRTIQDVLEEQSKDEDREAKKKKEEEAETPPESLSESEVTQEKEAEGEDQPV TSPEHRETSPEPPVDSTLEPAVSGKQEAQKEDSAKLPTRAPKTVSSFFAPRKPATKKEGK EEDPGTPRQEETKGPLDPPSYNPAKNNYHPIDDACWKPGQKVPYLAVARTFEKIEEVSAR LRMVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGRQ LDSVKAEAAEKGDVGLVAENSRSTQRLMLPPPALTAAGVFAKFRDIARLAGSASTAKKID VIKGLFVACRHSEARFIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPPAIVDAGK GRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLEHLPEHCRLSPGVPLKPMLA HPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRI PKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIYL NGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDTDQIAEFLEQSVKDSCEGLMVK TLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYDE ESEELQAICKLGTGFSDEELEEHYQRLQTLVLPTPRSYVRVDGAVAPDHWLDPSAVWEVK CADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDKKPEEATTSGQVACLYMKQSQIQN QQGADLDSDSDFY NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagtatcatgtcatttttctaccccaagaaggagggcaaagtgaaaaagcca gagaaggagacctccaacagcatcagagagacagagccacctccaaaggtggcactgaag gagcggaatggagaggtgcctgaaagcgattctccagtgaagaggccagggcggaaggtg gcccgggtcctgggcagtgaaggggaggaggaggacgaagccctcacgccatccaaagcc cagaaacctgccccaggctctccacaaggctcccctcccagccctgtcacatatcccgag agcagcccttccctctccactacctctcctgtggacatctcagcagggatcccaaagcgg cgcacagctcggaaacagcttcctaagcggacaatacaggatgtcctggaagagcagagc aaggatgaggacagagaggccaagaagaagaaggaggaagaagcagagaccccaccagaa agcctgtcagaatctgaagtgacccaagagaaggaggcagaaggagaggaccaacctgtg acatcccctgagcatcgagagacctccccagagcccccggtggatagcacgttggagcct gcggtgtctgggaagcaggaggctcagaaggaggactcggctaagctgcccaccagagcc cccaagacggtcagcagcttctttgccccacggaaaccggcaaccaagaaagaagggaaa gaagaggaccctggcactccaaggcaggaggagaccaagggacccctggaccctcccagc tacaatcctgccaagaacaactaccatcccattgatgatgcatgctggaagccaggccag aaggtcccttacctggctgtggcccggacatttgagaagattgaggaagtttctgctcgg ctccggatggtggagacgctgagcaacttgctgcgctctgtggtggccctgtcacctccg gacctcctccctatcctctacctcagcctcaaccgtcttgggccgccccagcagggtctg gaacttggtgtcggtgatggtgttctcctcaaggcggtggcccaggccacagggcggcag ctggactctgttaaggcagaggcagctgagaagggtgacgtggggctggtggccgaaaac agccgcagtacccagaggctcatgctgcccccacctgctctcaccgctgccggggtcttc gccaagttccgagacattgcccggcttgctggcagtgcttccacagccaagaagatagat gtcatcaaaggcctcttcgtcgcctgccgccactcagaagcccgattcattgccagagcc ctgagtggacggctgcgcctcgggctggcagagcagtcggtgctggccgccctcgcccag gctgtgagcctcacgcccccaggccaagaattccccccggccattgtggatgctgggaag ggccggacggcagaagcccgaaagacgtggctggaggagcaaggcatgatcctgaagcag acgttctgcgaggtgcctgacctggaccggatcatccctgtactgctggagcatggcctg gagcacctccccgagcactgcaggttgagcccaggggttccactgaaaccaatgctggcg caccccacccggggtgtcagcgaggtcctaaaacgttttgaagaggcagctttcacctgc gagtacaaatacgatgggcagagggcacagatccacgttctggaaggtggggaggtgaaa atcttcagcaggaatcaggaagacaataccggaaagtacccagacatcatcagccgcatc cccaagattaaactcccgtcagtcacgtccttcattctggacacagaagctgtggcatgg gaccgggaaaagaagcagatccagccattccaagtgctcaccacccgcaaacgcaaggag gtggatgcagcagagatccaggtgcaggtgtgtctatatgccttcgacctcatttacctc aatggagagtccctggtacgtgagcctctttcccgacgccggcagctgctccgggagaac tttgtggagacggagggcgagtttgtgttcgccacctccctggacaccaaggacacggac caaattgccgagttcttggagcagtctgtgaaagactcctgtgaggggctgatggtgaaa actctggacgtcgatgccacctatgagatcgccaagagatcccacaactggctcaagctg aagaaggactacctcgatggtgtgggcgacaccctggacctcgtggtgattggcgcctac ctgggccgtggcaaacgggctggccgctatgggggcttcctactggctgcctacgatgag gagagtgaggagctccaggccatatgcaagcttggaactggcttcagtgatgaggaactg gaggagcactaccagaggctccagaccctggtgctgcccaccccacgctcctatgtccgg gtcgacggtgctgtggcccccgatcactggctggaccccagcgccgtgtgggaggtgaag tgtgcggatctgtccttgtcgcccatctaccctgctgcccggggcctggtggatggtgag aaggggatctcccttcgctttcctcggtttatccgcgtccgtgaagacaagaagccagag gaggccaccaccagtggccaggtggcctgcctgtacatgaagcagagtcagattcagaac cagcagggcgcggacttagactctgactcagatttctactag

DBGET integrated database retrieval system