Vibrio vulnificus CMCP6: VV1_3092
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Entry
VV1_3092 CDS
T00108
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
vvu
Vibrio vulnificus CMCP6
Pathway
vvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VV1_3092 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvu03400
]
VV1_3092 (uvrB)
DNA repair and recombination proteins [BR:
vvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VV1_3092 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VV1_3092 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
AAO11415
UniProt:
Q8D891
LinkDB
All DBs
Position
I:complement(3159271..3161301)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKLYDLVSDYAPSGDQPTAIKQLTEGLDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPA
ILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPEAYLQMMLHIRRGDVMDQRDILRRLAELQ
YSRNDIAFERGQFRVRGEVIDVFPAESDQDAVRIEMFDDEIDCISVFDPLTGVVKQRDLP
RFTIYPKTHYVTPRERILQAIENIKQELRERQTYLRDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEYGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSAGEIADQVVRPTGLL
DPVLEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQPQALKRNIKDIMEL
GDITKSRKQKVSKTVPLSKVAEPSLSYNVLTPQQLEKEITKLEAQMYKHAQDLEFELAAQ
KRDEIEKLRQQFIANS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactttacgatctggtttctgactatgcgccatcgggagatcaaccaacggcg
atcaaacaactgacagaagggttagatgctggcttggctcaccaaaccttacttggggtg
acgggatccggtaaaacatttactttggctaatgtgattgctcaagcacaacgtcctgca
attctgctcgcgccaaacaaaactcttgccgcccaactttacggcgagatgaaagcgttt
ttccccaataacgcggtcgaatattttgtctcttactacgattattaccaacctgaagcc
tatgtgccaaccaccgacacctttatagagaaggactcatcggtcaacgctcatattgaa
caaatgcgtttatcggccaccaaagcgttattggagcgaaaagacgctattatcgtcgcc
tctgtttcggctatttatggtttgggtgatcccgaggcctacctgcaaatgatgttgcat
atacgccgtggtgatgtgatggatcaacgcgacatactgcgccgtttggctgagctgcaa
tatagccgtaacgatattgcttttgaacgaggccaatttcgcgtgcgcggagaggtgatc
gacgtttttccggctgaatcggaccaagatgcggtgcgcatcgagatgtttgatgatgag
atcgactgcatcagtgtgtttgatccactgaccggagtggtcaaacaacgcgatttaccc
cgctttactatttaccctaagactcactacgtcacacctcgagagcgtattctgcaggcg
attgaaaacatcaaacaagagctgcgtgagcgacaaacttacttgcgtgacaacaataaa
ttgttggaagagcaacgtattagtcagcgtacccaattcgatattgaaatgatgaatgag
ctgggattctgctcgggcatcgaaaactactcgcgttacctcagcggtcgagcggaaggt
gagccgcctccaacgttatttgactacttaccacacgacggtttgttgatcattgatgaa
tctcacgtgacagtgccacaaattggcgcaatgtataaaggtgaccgctcacggaaagag
accttggttgaatatggtttccgtttgccttcagcattggacaatcgaccattgaaattt
gaagagttcgaagcgcttgcgccacaaactattttcgtttcagccactccgggtaattac
gaactagagaaaagtgcgggcgaaattgctgaccaagtggtgcgtccgaccggattgctc
gatcctgtactggaagtgcgaccagtggcgactcaagtggatgatctgctttctgagatc
cgcattcgcgcggtgaaagatgaacgcgtgttagtgacaacactgaccaaacgtatggcg
gaagatctaactgaatacttgcatgagcacgatgtgaaagtgcgttacctacactctgat
atcgacacggttgaacgagtggagatcattcgtgacttgaggctaggggagttcgatgtg
ttggtggggattaacttgttacgcgagggtctcgacatgcctgaagtgtctttggttgcg
attctcgatgctgataaagaaggctttttacgttcagagcgctcattgattcagaccatt
ggccgtgcagcccgtaacctccatggtaaagcgatcttgtatgcagactccatcaccaaa
tcgatgaagaaagcgatggatgaaactgaacgacgccgtgagaaacagcaagcgtacaat
gaaaagatgggcattcagcctcaagccttgaagcgtaatatcaaagatattatggagctg
ggcgatattacgaaatcccgcaagcagaaagtgagcaaaacggtgccattgtcgaaagtg
gctgaaccatcactgtcctataatgtgttgacgccacagcaactggaaaaagaaatcaca
aaactggaagcgcaaatgtacaaacacgctcaggatttggaatttgagttagccgcgcag
aagcgtgatgaaattgaaaagttgcgtcagcagtttattgctaacagctaa
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