Vibrio vulnificus YJ016: VV1193
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Entry
VV1193 CDS
T00150
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
vvy
Vibrio vulnificus YJ016
Pathway
vvy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VV1193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvy03400
]
VV1193
DNA repair and recombination proteins [BR:
vvy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VV1193
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VV1193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UvrD-helicase
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
BAC93957
UniProt:
Q7MM80
LinkDB
All DBs
Position
I:1209387..1211429
Genome browser
AA seq
680 aa
AA seq
DB search
MRGKMSKLYDLVSDYAPSGDQPTAIKQLTEGLDAGLAHQTLLGVTGSGKTFTLANVIAQA
QRPAILLAPNKTLAAQLYGEMKAFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVN
AHIEQMRLSATKALLERKDAIIVASVSAIYGLGDPEAYLQMMLHIRRGDVMDQRDILRRL
AELQYSRNDIAFERGQFRVRGEVIDVFPAESDQDAVRIEMFDDEIDCISVFDPLTGVVKQ
RDLPRFTIYPKTHYVTPRERILQAIENIKQELRERQTYLRDNNKLLEEQRISQRTQFDIE
MMNELGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDR
SRKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSAGEIADQVVRP
TGLLDPVLEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVKVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQPQALKRNIKD
IMELGDITKSRKQKVSKTVPLSKVAEPSLSYNVLTPQQLEKEITKLEAQMYKHAQDLEFE
LAAQKRDEIEKLRQQFIANS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgagagggaaaatgagcaaactttacgatctggtttctgactatgcgccatcgggagat
caaccaacggcgatcaaacaactgacagaagggttggatgctggcttggctcaccaaacc
ttacttggggtgacgggatccggtaaaacatttactttggcgaatgtgattgctcaagca
caacgtcctgcaattctgctcgcgccaaacaaaactcttgccgcccaactttacggcgag
atgaaagcgtttttccccaataacgcggtcgaatattttgtctcttactacgattattac
caacctgaagcctatgtgccaaccaccgacacctttatagagaaggactcatcggtcaac
gctcatattgaacaaatgcgtttatcggccaccaaagcgttattggagcgaaaagacgct
attatcgtcgcctctgtttcggctatttatggtttgggtgatcccgaggcctacctgcaa
atgatgttgcatatacgccgtggtgatgtgatggatcaacgcgacatactgcgccgtttg
gctgagctgcaatatagccgtaacgatattgcttttgaacgaggccaatttcgcgtgcgc
ggagaggtgatcgacgtttttccggctgaatcggaccaagatgcggtgcgcatcgagatg
tttgatgatgagatcgactgcatcagtgtgtttgatccactgaccggagtggtcaaacaa
cgcgatttaccccgctttactatttaccctaagactcactacgtcacacctcgagagcgt
attctgcaggcgattgaaaacatcaaacaagagctgcgtgagcgacaaacttacttgcgt
gacaacaataaattgttggaagagcaacgtattagtcagcgtacccaattcgatattgaa
atgatgaatgagctgggattctgctctggcatcgaaaactactcgcgttacctcagcggt
cgagcggaaggtgagccgcctccaacgttatttgactacttaccacacgacggtttgttg
atcattgatgaatctcacgtgacagtgccacaaattggcgcaatgtataaaggtgaccgc
tcacggaaagagaccttggttgaatatggtttccgtttgccttcagcattggacaatcga
ccattgaaatttgaagagttcgaagcgcttgcgccacaaactattttcgtttcagccact
ccgggtaattacgaactagagaaaagtgcgggcgaaattgctgaccaagtggtacgtccg
accggattgctcgatcctgtactggaagtgcgaccagtggcgactcaagtggatgatctg
ctttctgagatccgcattcgcgcagtgaaagatgaacgcgtgttagtgacaacactgacc
aaacgtatggcggaagatctaactgaatacttgcatgagcacgatgtgaaagtgcgttac
ctacactctgatatcgacacggttgaacgagtggagatcattcgtgacttgaggctaggg
gagttcgatgtgttggtggggattaacttgttacgcgagggcctcgacatgcccgaagtg
tctttggttgcgattctcgatgctgataaagaaggctttttacgttcagagcgctcattg
attcagaccattggccgtgcagcccgtaacctccatggtaaagcgatcttgtatgcagac
tccatcaccaaatcgatgaagaaagcgatggatgaaacggaacgacgccgtgagaaacag
caagcgtacaatgaaaagatgggcattcagcctcaagccttgaagcgtaatatcaaagat
attatggagctgggcgatattacgaaatcccgcaagcagaaagtgagcaaaacggtgcca
ttgtcgaaagtggctgaaccatcactgtcctataatgtgttgacgccacaacaactggaa
aaagaaatcacaaaactggaagcgcaaatgtacaaacacgctcaggatttggaatttgag
ttagccgcgcagaaacgtgatgaaattgaaaagttgcgtcagcagtttattgctaacagc
taa
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