Vibrio ziniensis: G5S32_02470
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Entry
G5S32_02470 CDS
T07449
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vzi
Vibrio ziniensis
Pathway
vzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5S32_02470 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vzi03019
]
G5S32_02470 (pcnB)
Enzymes [BR:
vzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
G5S32_02470 (pcnB)
Messenger RNA biogenesis [BR:
vzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G5S32_02470 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QIH40914
UniProt:
A0A6G7CFP6
LinkDB
All DBs
Position
1:complement(528878..530239)
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AA seq
453 aa
AA seq
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MNNNDLNESEHHIYPSLDLNIVTRQEHNISRKQISDNALKVLYRLQGAGFDAYLVGGGVR
DLLLEEVPKDFDIATNATPEEIRQLFRNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQEE
NKQLAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGLEDLEDRLV
RLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEELAPLLRDIPAARLYEEMLK
MLQSGHGLETYHLMREYNLFQQVFPTIARHFTEDYSSQTEHMLDLVLDSTDQRIEEDKRI
NPAFMFAAIFWYPMVKLAEEMMETHNLNYYDAIMEASNKILDEVVKSIAIPRRHTATMRE
IWQLQLRLPRRNGKRAFRLMELNKFRAGFDFLEMRGEVEDGEVKQLADWWQTFQTAGRNM
RQAMVTDLDSVSKPSSTRRRRPSTRKKKSKPTS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaacgacttaaacgaaagcgaacatcacatatatccaagcttagacttgaat
atcgtcacgcgccaagagcacaacatttcgcgtaagcagattagcgataacgcgttaaag
gtgttgtatcgcctccagggtgcgggttttgacgcctacctagtcggtggtggtgttcga
gatttactcctcgaagaagtaccaaaagacttcgatatagcaactaacgcaacacctgaa
gaaattcgccagttattccgtaactgccgtctgatcggtcgtcgtttccgtcttgcacac
attatgtttggacgtgacatcattgaagttgcgactttccgaggccatcaccaagaagaa
aataaacagcttgctgctcagtcagaagcaggaatgctgctgcgtgataacgtctacggc
accatcgatgaagatgcagagcgtcgagacttcaccatcaacgccatgtactacaacatc
gcggattacagcattcacgattatgctggcggtttagaagatctggaagacagattagtt
cgtcttattggcgaccctgaaacccgttaccgcgaagaccctgttcgtatgcttcgggct
gtacgctttgcagtaaaactcgatttcgacatcgaagaagacacggctgcacctattgag
gagctcgcgccattactgcgtgatatcccagcggcacgtctttacgaagaaatgctgaag
atgctgcaatcaggacacggtttggaaacttaccacctgatgcgtgaatacaacttgttc
caacaagtattcccgacgattgcacgtcatttcactgaagattattcatctcaaactgag
cacatgctcgatcttgtgttggattctaccgaccagcgcattgaagaagataagagaatc
aatcctgccttcatgtttgcagccattttctggtatccgatggtcaagcttgctgaagag
atgatggaaacgcataaccttaattattacgatgccatcatggaagcgagcaataaaatc
ctcgatgaagtagtgaaatctatcgcgattcctcgccgtcacactgcgacaatgcgcgaa
atttggcagctacaattacgcctgcctcgccgcaatggtaaacgcgcattccgcttgatg
gaactgaataagttccgtgctggttttgatttcctagaaatgcgtggtgaagttgaagat
ggcgaagtgaagcaactggctgattggtggcaaactttccaaacagcgggtcgcaacatg
cgtcaagcaatggtgactgacttagatagcgtgagtaaaccatcaagtacacgccgtcgt
cgcccatcgacacgtaagaaaaagagcaagccaacgtcatga
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