Vibrio ziniensis: G5S32_08330
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Entry
G5S32_08330 CDS
T07449
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
vzi
Vibrio ziniensis
Brite
KEGG Orthology (KO) [BR:
vzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vzi03400
]
G5S32_08330
DNA repair and recombination proteins [BR:
vzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
G5S32_08330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA
AAA_22
zf-tcix
DZR
AAA_16
zf-ribbon_3
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QIH41997
UniProt:
A0A6G7CIQ8
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All DBs
Position
1:1825829..1827565
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AA seq
578 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYESYGLTGAVFSAGLGRKETNQQVVFASVQSVVRNLDAFKNQFSLLVIDECHR
VPDDKDSSYQKVISHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC
IFELPIQYLLDEGFLTHARLIDAPVLSYDFSQLKPANTGRYKESELDLVIEQSKRATPQI
VSQIVELSKDKQGVMIFAATVRHAQEIMGLLPEEHSALVIGDTPSPERDRIINGFKMREI
KYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSQGKDECLVLDYAGNTY
DLYQPEVGDPKPDSTSEIITIPCPACGFNNNYWGKLDANGFLIEHYGRKCQGYFTNEETN
EREHCGYRFRAKYCNECGADNDIAARICHECDATLVDPDKKLKEALSLKDALVFECLNMD
LSVHKDDKGKSQLRVTYIGDNNAQVHEFWALTTPKQKAVFKERFVRPHLADRHRPFDEAS
PSKVVDNQHRFRPPQFVIARKSGRFWKMRDKIFADELV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtacacacttcgcccatatcaagctgactcagtaaaagcggttattcactactttcgc
aaacactcgactcccgcagtcatcgtgctaccaacgggtgcagggaaaagtttggtcatt
gccgaactggcaagactggctaaaggtcgcgtgttggtacttgctcatgtcaaagagttg
gttgaacagaaccacgcaaagtatgaaagctacggtttaactggcgctgtattctctgcg
ggcttagggcgtaaagagacaaatcagcaagtcgtcttcgcatcagtacaatcggttgtg
cgtaacttagacgcatttaaaaaccagttttccttgttggttattgatgaatgtcaccgc
gttcctgatgataaagacagcagttatcaaaaagtgatttcacatcttcttgaactcaat
cctggcatgaaagtgcttggcttaacggctacgccttatcgcttggggatgggttggatt
tatcaatatcacactcgaggattagtccgcagcgaagagcctcgtttctttcgcgactgc
attttcgaactcccgattcaatatctgctggatgaaggcttcctaactcacgcacgctta
attgatgctccagtactcagttatgacttctcacagctcaagcctgcaaatactgggcgg
tacaaagaatctgaactggatttagtgattgaacaatctaaacgtgcaacaccccagatt
gtttctcaaatcgttgagctatccaaagacaaacaaggtgtaatgatatttgctgccacg
gttcgtcatgcccaagaaatcatgggattactacctgaagaacattccgcattagtaata
ggcgatacgccatctccagaacgagaccgaattattaatggcttcaagatgcgtgaaatt
aaatatctggtcaacgtgtctgtcctaacgactggctttgatgcaccccatgttgatttg
attgcaattttacgccccacagagtcagtgagcttgtatcagcaaatcgtcggacgaggt
ctacgtttatctcaagggaaggacgagtgtttggtgcttgattacgcaggaaacacttac
gatttgtatcaacccgaagtgggcgacccaaaacccgattccaccagcgaaatcataacc
attccctgcccagcttgtggtttcaacaataactactggggaaaactagacgctaacgga
tttcttatcgaacactatggtcgtaaatgccaaggctattttaccaatgaagaaaccaac
gaacgcgaacattgcggttaccgtttcagagccaagtattgtaacgaatgcggagcagac
aatgatattgcagcccgtatctgtcacgagtgcgatgccaccttggttgaccccgataaa
aagctcaaagaagcgttgagtcttaaagatgctctagtctttgaatgcctcaacatggat
ttgagtgtacataaagatgacaaaggcaagtcacaactaagagtgacctacattggtgac
aacaacgcacaagtacacgaattttgggcactgactacgccaaaacaaaaagccgtgttt
aaagaacgctttgtacgaccacatttggcagacagacatcgaccattcgacgaagcgtca
ccttcgaaagtcgtcgacaatcaacatcgtttccgcccgccacaatttgtcattgccaga
aaatcaggtcgtttctggaaaatgcgcgacaaaatatttgctgatgagctagtgtaa
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