Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis: mfd
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Entry
mfd CDS
T00101
Name
(GenBank) DNA metabolism
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
wbr
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Pathway
wbr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
mfd
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wbr03400
]
mfd
Enzymes [BR:
wbr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
mfd
DNA repair and recombination proteins [BR:
wbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
mfd
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
BAC24245
UniProt:
Q8D3A2
LinkDB
All DBs
Position
complement(105179..107236)
Genome browser
AA seq
685 aa
AA seq
DB search
MNITKNIDVKNFSSDIEFISGDFIIHIDHGIGKYIGTKFIETSGIKNEYMVIQYAENDIL
YLPFTSLHLISKYKKNNYDSNLIILDKLGSDTWKKYSKKIIKKINDIAVEILDNASERLS
KKGFSFELKFNKYKLFCNECNFDLTQDQNKAILEVIDDMKKSSVMNRLICGDVGFGKTEI
AMRAAFIAIQNKKQVSLLTPTTLLSQQHFDNFKLRFKKWPIKISILSRFLNKKEQNKVIK
MILIGEIDILIGTHRILQKDIIWKDLGLLIIDEEHRFGVSQKECIKTVRTGVDVLSLTAT
PIPRTLNMAMNGLRDLSIISTPPKYRLPVKTFIYEYNKDIIKKAIKNELSRKGQIYYLHN
NISTINETSKILKKIAPKVRIKISHSKMCKNLLKKTMQDFKENKFDMLVCTSIIETGIDI
ANANTIIIEKANQFGLAQLNQLRGRVGRSFRQAYAYLFTSKSNSLNENSKKRLEAISSIN
KLGSGFSLSINDLEIRGSGELLGSKQSGKINSIGISLYNKLLKKSIKLIKSGKELSLETI
KENFTEVNLNIPAFIPDSYIPDVSIRLFYYKKFFSETKSEINNLKNIITSKFGKLPKSVC
YLIEIAYIRQKANFIGIKIININFKGGFVEFNKNNSINYESFIRLLKNYPKIYKIISQTK
LRIKYLTKSHEEKIDYIKNFLNYIK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaatattacaaaaaatatagatgttaaaaatttttcttcagatattgaatttatatct
ggagattttattattcatattgatcatggtataggaaaatatataggtactaagtttata
gaaacaagtggaataaaaaatgaatacatggttattcaatatgctgaaaatgatattttg
tacttgccttttacttctttgcatttaataagtaaatataaaaaaaataattatgattcc
aatctaataattttagataaacttggatctgatacttggaaaaaatatagcaaaaaaata
ataaaaaaaataaatgatatagcagttgaaatattagacaatgcatctgaaagattgtct
aaaaaaggattttcttttgaattaaaattcaataaatataaattattttgcaatgaatgc
aattttgatctaactcaagatcaaaataaagctattctagaagttatagatgatatgaaa
aaaagttcagtcatgaatagattgatatgtggagatgtagggtttggaaaaacagaaatt
gctatgagagctgcatttatagctattcaaaacaagaaacaagtatctttattaactccc
acgactcttctatctcaacaacattttgataacttcaaattaagatttaaaaaatggcct
ataaaaatttcaattttatctagatttttaaataaaaaagaacaaaacaaagtaataaaa
atgattttaattggagaaatagacattcttataggaactcatagaattttacaaaaggat
attatttggaaagatttaggattattaattatagatgaagaacatagatttggagtttct
caaaaagaatgtataaaaactgtaagaactggagttgatgtattgtctcttacagccaca
cctataccaagaacattaaatatggcaatgaatggattacgtgatttatccataatatcg
actcctccaaaatatcgtctacctgtaaaaacttttatttatgaatataacaaagatatt
ataaaaaaagctattaaaaatgaattatctagaaaaggtcaaatatattatttacataat
aacatttcaactataaatgaaacttcaaaaatcttaaaaaaaatagcgccaaaagttaga
ataaaaataagtcattcgaaaatgtgcaaaaatctattaaaaaaaacaatgcaagatttt
aaagaaaataaatttgatatgttagtatgtacttcaataattgaaaccggaattgatatt
gccaatgcaaatacaataataatagaaaaagcaaatcaatttggattggctcaactcaat
caacttagaggaagagtaggaagatcttttaggcaagcgtatgcttatttatttacttct
aaatcaaattcattaaatgaaaattctaaaaaaagattagaagcaatttcttctataaat
aaattaggatctggattttctttatcaataaatgatttagaaataagaggatctggagaa
ctattaggatctaaacaaagtggaaaaattaattctattggaatatctttatataataaa
cttttaaaaaaatctataaaattaattaaatctggaaaagagctatctcttgaaacaata
aaagaaaactttacagaagttaatttaaatattccagcttttattcctgattcatatatt
ccagatgtttctatacgtttgttttattataaaaaattttttagtgaaactaaatcagaa
attaataatttaaaaaatataataacaagtaaattcggaaaacttccaaaatctgtatgt
tatttgatcgaaatagcttatataagacaaaaagccaattttattggtataaaaataata
aatataaattttaaaggaggttttgttgaatttaataaaaacaattcaattaattacgaa
tcttttataagactattaaaaaattatcctaaaatatataaaataatttcacaaacaaaa
ttaagaattaaatatttaactaaaagtcatgaagaaaagatcgattatataaaaaatttc
ttaaattatattaaataa
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