Williamsia herbipolensis: OG579_00625
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Entry
OG579_00625 CDS
T09708
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
whr
Williamsia herbipolensis
Pathway
whr02024
Quorum sensing
whr03060
Protein export
whr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
whr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OG579_00625 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OG579_00625 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OG579_00625 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
whr02044
]
OG579_00625 (ffh)
Enzymes [BR:
whr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OG579_00625 (ffh)
Secretion system [BR:
whr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OG579_00625 (ffh)
Eukaryotic Sec-SRP protein
OG579_00625 (ffh)
BRITE hierarchy
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
APS_kinase
Zeta_toxin
nSTAND3
AAA_22
AAA_31
MMR_HSR1
MeaB
ArsA_ATPase
cobW
TctA
AAA_18
AAA_16
MobB
AAA_33
CLP1_P
ATP_bind_1
Thymidylate_kin
NTPase_1
AAA_30
TsaE
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
WUM20397
LinkDB
All DBs
Position
148033..149604
Genome browser
AA seq
523 aa
AA seq
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MFDSLSDRLTGALKDLRGKGKLTDADIDRTCREIRLALLDADVSLQVVRSFIARIKERAK
GAEVSGALNPAQQIVKIVNEELVGILGGETRRIAFAKTPPTVIMLAGLQGAGKTTLAGKL
SAWLTKQGHTPLLVACDLQRPGAVSQLQIVGERAGTPVFAPHPGTSVGGEGELGVSAADP
VEVARAGVAEARAKHHDIVIVDTAGRLGIDEELMAQAAGIRDAVQPDEVLFVVDAMIGQD
AVTTAEAFASGVGFTGVVLTKLDGDARGGAALSIREMTGAPIMFASSGEKLEEFDTFHPD
RMASRILGMGDVLSLIEQAEEHWDATQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN
LLGMLPGAGQMKDALSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVAV
SEVNQLVDRFYEARKMMAAMSGRMGMPGANRRTNRSKKGKKGKKGSGRGPTPPKMRGGMP
GMGMPGMPAGFPDLSNMPAGLDQLPPGLEGIDISQFQKPKKRG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattcgctgtccgaccggttgaccggggcactcaaagacctgcgcggcaaggga
aagctcaccgatgccgacatcgaccgcacctgccgggagatccgcctggccctgctcgat
gccgacgtgtcgctgcaggtggtccgcagcttcatcgcccggatcaaggagcgcgccaag
ggcgcggaggtgtcgggtgcgctgaacccggcgcaacagatcgtcaagatcgtcaacgag
gagctcgtcggcatcctcggtggtgagacccggcgcatcgcgttcgcgaagaccccgccc
acggtcatcatgctcgcgggtctgcagggtgccggtaagacgacgttggcgggcaagctc
tcggcgtggttgaccaagcagggtcacaccccactgctcgtggcgtgtgacctccagcgc
cccggcgcggtgagccagctgcagatcgtcggtgagcgtgcgggcaccccggtgttcgcg
ccgcatccggggacctcggtcggcggcgagggcgagctcggggtgagcgccgccgacccg
gtggaggtcgcgcgcgccggtgtcgccgaggcccgcgcaaagcaccacgacatcgtcatc
gtcgacaccgccggccgactcggcatcgacgaggaactgatggcgcaggccgcgggcatc
cgcgacgccgtgcagcccgacgaggtcctgttcgtcgtcgacgccatgatcggtcaggac
gcggtcaccaccgccgaggccttcgcctccggtgtcggtttcaccggtgtcgtgctgacg
aaactcgacggtgacgcccgcggtggcgccgcgctgtcgatccgcgagatgaccggtgcg
ccgatcatgttcgcgtcgtcgggcgagaagctcgaggagttcgacaccttccacccagac
cgcatggccagccgcatcctgggcatgggtgacgtgctgagcctcatcgagcaggcagag
gagcactgggacgccacgcaggccgaggcggccgcggcgaagatcacccagggcgagctc
accctcgaggacttcctcgagcagatgctgatgatccggaagatggggccgatcgggaac
ctgctgggcatgctgcccggggccggtcagatgaaggacgccctgagccaggtcgacgac
aagcagctcgaccgtgtgcaggcgatcatccgcggcatgacccccgccgaacgcgacaac
ccgaagatcatcaacgcctcgcggcgtctgcgtatcgccaacggatccggtgtcgcggtg
agcgaggtcaaccagctcgtcgaccgcttctacgaggcccgcaagatgatggcggctatg
tcgggacgcatgggcatgcccggcgcgaaccgccgcaccaaccgcagcaagaagggcaag
aaggggaagaagggatccggtcgcggacccaccccgccgaagatgcgcggtggcatgccc
gggatggggatgcccggcatgcccgccgggttcccggacctgtcgaacatgcccgccgga
ctcgatcagctgccgccggggctcgagggcatcgacatctcgcagttccagaagccgaag
aaacgcggctga
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