Wallemia ichthyophaga: J056_001647
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Entry
J056_001647 CDS
T03457
Name
(RefSeq) Nucleoporin NSP1
KO
K18721
nucleoporin NUP1
Organism
wic
Wallemia ichthyophaga
Pathway
wic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
J056_001647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wic03019
]
J056_001647
Messenger RNA biogenesis [BR:
wic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
J056_001647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
20374599
NCBI-ProteinID:
XP_009269550
UniProt:
R9ABQ6
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Position
Unknown
AA seq
1267 aa
AA seq
DB search
MSDLGTSIGPQRRDSRYTPSKPSKPYQRPSPTPTPTQNNTASLLSSVRSLVSKPFSWLSG
GVSNHPDEESAQQVQSPWSKGEEPRSEHAPRAPHAPPKAKQRPHTFYNDLPPSMAKSNHL
QIPGNRQTTLSPKMSSSFNGSGSGYGSAYNNNNNNLQNSPFTPVKHPRRSLLSNGRNASP
LLPRTRYRTPTVPTKDHNPLQSILSAATNDPYHSTAHKRSSVIDPSPERPSKRRMVYNEQ
ADEFMSLEEAQARKPQPQPPKNEAERILLALEKMRTPLTDARKSNPLSARGPLPSQSQQS
QQSYNLPTISIPIPKPNPAKSKLAPPVNKKAEAMISPYARSKHRREQERRHREHDLKSSK
LQERLPKTQQRPRSKIAVPSDDEDEHEDGYVGEREQGDKQDNSSKGVDKPNHSSPHTAPI
ATTSAAKLFAPMSGQDQFKPGKVGEKDANGADKGPSATDRARSSLRARTMTSSRQHSSAA
RKPREDTAEIDEEEEERKRQAERDALKSVPVVNFNFDGIASQQSAPTPAPAPNPKLNFNL
PEETDVKEQNEQTKPATPKPATPFSFGGESTTPKGPPPAAIFDNKDEKEKEKKDDSKPQS
QPPLGFSFGAPKSEKTQKEKEEEENSKKAAAEKPNPFALFEANKKEDDKPKSVPTFSFGG
TAEHNKDDKDDKEETKSNPFSPGAPLEKKDENNQKNEKPAAAPASLGGFSFGKPPSQDSK
PASPFSFGGAQTDEKTPSLLSRFSNKPEGKADTTDATGGDKPASPAPLFGKPAEEKGESS
ASKSSAFSFGVAPSTKPASSSPFSFGGGGSSGGSFGATKPAEEEKKDVEKGTGGAFSFTK
PQSDESKPNSSNGVFGGGSSGSGAAFSFGAPSEIKESKESKNEVNGGSGSFAFGQPKPAE
NEEKKQPTFSFGQPAKADEKSPGAAFSFGGSAPATDDNKPKSSSPFSFGAGGNDTAKPPV
FGAPASAPAPASQSTEPIKPSSPFSFGASSTNPTDASSNTSKPPFAFGGSQTTLFGNSQP
ASTDKPTFSFGGATASASAGENKSSFAFGGGEAKPTSTSETVSSTPSFGFGGGGGSIPSF
QFGGAGGTGSAGGAFGAAKPQPQQQQQSNGGGDSMEESPTRPAGSAPLFGAPATAPTSTP
TPFGGGASSGGFGFGQSQPPAPAAGAGASPAFSFGGGSAPSSGASTGAFGFGAAPAPAPA
PSASSTNNTAPSSPFAFGSSAPAPAPNPSTPQQAPGSPSLFNIGTGSPAPGTPNSSRPVK
PLRRNRR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttaggcacttcaattggcccacagaggcgtgattcaaggtacacgccctct
aagccttcaaaaccgtatcaaagaccgagtccaactcccactccgacacagaataacact
gccagtctcttatccagcgtacgctcactcgtctccaagcctttttcctggctttctggg
ggcgtgagtaatcatccagacgaagagtccgctcaacaagttcaatctccatggtctaaa
ggtgaagaaccacgctcagaacacgcaccacgcgcaccacacgctccaccaaaggctaaa
caaaggccgcacaccttttataatgatctgccgccttcaatggctaaatctaatcattta
cagattcctggtaataggcaaactactctttcacctaaaatgtcttcttctttcaatggc
agtggtagtggttatggctctgcctacaacaacaacaacaacaatttacaaaactctcct
ttcactcccgttaaacacccacgccgctctctcctctctaatggcaggaacgcttccccc
ttactcccacgcaccaggtatagaactccaactgttcccactaaggatcacaaccctctg
caatccattctctccgcggcaaccaacgatccttaccactcgactgcccataaacgatca
tctgttatcgatccatcccctgaaagaccgtccaagagaagaatggtatacaacgaacaa
gcagacgagttcatgtctttagaggaagcccaagccagaaaacctcaaccccaacctcca
aaaaacgaggctgagagaattctactggctttggagaagatgcgaactccgctcactgat
gcacgcaaatcaaatcctctttctgctagaggacctcttccatcacaatcacagcaatca
cagcagtcatacaacttgcctaccatctcaattcctattcccaagccaaaccctgcaaag
agcaaactagctcctccagtcaacaaaaaggcagaagctatgattagtccctacgcacgc
agcaagcatcgcagggaacaagagagacgccaccgcgagcatgacctgaaaagtagcaaa
ttacaggagagactgcccaaaacacaacaacgaccacgtagcaagatagctgtacccagc
gatgacgaggatgagcatgaagacgggtatgtaggtgagcgagagcagggggataaacaa
gacaattcaagtaagggcgtagacaagccaaaccactcttccccacataccgccccaatc
gctactacgagcgcggctaaattgttcgctccaatgtctggacaggatcaattcaaaccg
ggcaaagttggtgaaaaggacgcaaatggcgcagataaaggccctagtgctaccgataga
gctaggtcgtcgctcagggcgcgcaccatgaccagcagcagacaacactcatcagccgct
cgcaaaccacgtgaagatactgctgaaatcgatgaagaagaggaggaacgtaagcgtcag
gcggaaagggatgctttgaagagtgttccagtggttaatttcaactttgatggtatcgcc
agtcaacaaagtgctcctactcctgctcctgctcctaatcccaagcttaacttcaattta
ccggaagaaactgatgttaaggagcagaatgagcagactaaacctgccacacccaaacca
gcaacacctttctctttcggcggtgagtcgacaacacccaaaggacctccaccagcagcc
atctttgacaataaggatgagaaggagaaggagaagaaggatgacagcaagccacaatca
caaccaccactcggtttctcttttggcgcacccaagtctgaaaaaacccagaaggagaaa
gaagaagaagagaactcaaagaaagcagcagcggaaaaaccaaatccattcgccctgttt
gaagccaacaagaaggaggatgacaagccaaagtcagtacctactttcagctttggtggt
actgcagagcataataaggatgacaaggatgacaaggaggagaccaagtccaatccattc
tctcctggcgctccgttagaaaagaaggacgaaaataaccagaagaatgaaaagccagct
gctgcacccgcttcattaggtggattctcattcggcaagccaccaagccaagactccaaa
cctgcatcacccttctctttcgggggagcacagacggacgagaagacgccttctcttctc
agccgcttcagcaacaagcctgaaggcaaggcagataccaccgatgcaactggtggagat
aaaccagcgtctccagctccattattcggcaagccagctgaagaaaagggtgagagtagc
gcaagcaaaagcagtgcatttagtttcggtgttgcgccttctaccaaacctgcatcaagc
tcgcctttctccttcggtggaggtggtagctctggtggttcgtttggagctacaaagcca
gcggaagaagagaagaaagatgtcgaaaaaggcacgggtggtgcattctcattcaccaaa
ccgcaatcggatgagtcgaaacctaacagctccaacggcgttttcggaggcggtagttca
ggttcaggagcagcattctcctttggtgcccctagtgagattaaggagagcaaagagagc
aagaatgaggtcaatggtggcagcggttcttttgctttcggacagcctaaacccgctgaa
aatgaggagaagaaacagccgacattctctttcgggcagcctgcaaaagctgacgaaaag
tcacctggagcagcattttcttttggaggtagtgccccagcaacagacgataacaaacct
aagtcaagctctccattctcttttggcgctggtggtaacgacactgcaaagccaccagtg
ttcggagcacctgcatctgcgccagcacctgcatctcaatccactgaaccaataaagcca
tcaagtccattcagctttggtgcttcgtccacgaaccccaccgacgcctcttccaacacg
tccaaacctccattcgcattcggcggctcgcagacgactttgtttggaaattcgcagcca
gccagtaccgataagcccacattttcatttggtggagccactgcgtctgcatcggcgggt
gagaacaagtcgtcgtttgcttttggcggtggcgaagcgaagccgacgagcacgagtgaa
actgtctcgtcgacgccctcatttggatttggtggtggtggtggtagcataccttctttc
caatttggtggtgctggcggtactggaagtgctggtggggcatttggcgcggcaaaaccg
caaccacagcagcagcagcagagcaatggcggtggtgattctatggaagaatccccaaca
cgtccagccggttcagcaccacttttcggtgcaccagcgactgcacccacatccacaccc
acgccatttggaggtggtgcttccagtggaggcttcggattcggccagtcacaaccacct
gcacctgcagcaggagcgggagcatcgcctgcattctcgttcggcggcggcagtgcaccc
tcgagcggcgcaagcacaggagctttcggctttggagcagcacccgctccagctccagct
ccaagcgcctctagcaccaacaataccgcccctagctctccatttgcattcggttcatct
gcacccgctcccgcgcccaacccatccaccccgcaacaagctcctggatcaccttccctc
ttcaacataggcacgggatcgccagctccaggcacacccaactcatcgcggcctgtgaag
ccattgcgtcggaatagacgctaa
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