Wallemia ichthyophaga: J056_002845
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Entry
J056_002845 CDS
T03457
Name
(RefSeq) Transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
wic
Wallemia ichthyophaga
Pathway
wic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
wic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
J056_002845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wic03021
]
J056_002845
03036 Chromosome and associated proteins [BR:
wic03036
]
J056_002845
Transcription machinery [BR:
wic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
J056_002845
Coactivators
SAGA/TFTC/STAGA complex
J056_002845
Chromosome and associated proteins [BR:
wic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
J056_002845
STAGA complex
J056_002845
TFTC complex
J056_002845
SAGA complex
J056_002845
SLIK complex
J056_002845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
20375797
NCBI-ProteinID:
XP_009270385
UniProt:
R9A9C4
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MEQQFEPKPRPEIQAGIYPTEVIRDVAESVGITGLTDSVATGLAGDVEYRITLVIEEANK
FMKHSKRSTLLPCDIENALKVLNIEPLYSPHPASSVPTYRRVPTSAGPVFALEDKEIDFE
KALREPLPRLSKGPSYTAHWLAIEGVQPLIPQNPAPVDAAPIHQLAPAQPALNNNSSNPN
PSSSTTIHPPVKHLLSHELQLYYIRLTSALLSPASNASEARQAALASLRGDPGLGGLVPY
LVRFAAEKVSTNLSNVDIVDAMLGVVHSLIENQTLFIEPYLHQILPLLLTTLLTSSYPAP
PNQHALWLRQKSASLISRLLHEYGSSYPTLSGRVAKTLLSALKGDQHSVGEIASRDVGTR
MGSLLGLMAVGKHTAIRALIHDSGIKGISELTESLDQDARLQVVDTVVEVLIQVLPESKA
AKVDSKHIENLCAQVCGSIITSHVFLKKPELASSIVSTLEDEKFVE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcagtttgaacctaaaccgaggcctgaaattcaagctggtatttatcccact
gaggttattcgtgacgtagccgagagcgtcggtatcactggtttaactgacagtgtcgca
acgggcttggctggcgatgtagaataccgcatcactcttgtcattgaggaggcaaacaag
ttcatgaagcactcaaagcgctccacgctcctcccttgtgacattgagaacgcgctcaag
gtcctcaacatcgagcccctctactccccgcaccctgcttcctcagtgcctacttatagg
agagtccctacctcggctggccccgttttcgctttggaagacaaggaaatcgactttgag
aaggctttgagggagcccctcccgagactctccaaaggtccttcctacactgctcattgg
ctggccatcgagggtgttcaaccactcatcccccagaaccccgctcctgttgacgctgct
cctattcatcaactcgctcccgctcaacctgctctgaataataattcctcaaaccctaat
ccctcctcatccaccaccattcaccccccagtcaagcacctcctttctcacgaactgcag
ctatactacattaggctcacctccgcccttctctcccccgcttcaaatgcttccgaggct
agacaagctgccctcgccagtttgcgcggtgaccctggtctcggcggtctcgttccatac
ctcgttaggttcgccgcggagaaggtctcaactaacttgtccaatgttgatatcgtagac
gccatgcttggtgtcgtacattctctcatagaaaatcaaactctcttcatcgaaccttac
ctacaccagatcctcccattgctcctaactacccttctcacctcttcctatcctgcccct
cctaatcagcacgccctttggctacgtcaaaagtcagcatcactcatctctaggcttctc
catgagtacggtagcagttaccctactttgtcaggaagagttgccaagacgctcctcagt
gcactcaagggtgaccaacactccgttggtgagattgcttctcgtgatgtaggaactaga
atgggtagcttgttaggtcttatggcggtaggaaagcacacggcaatcagagcactcatt
catgacagcggtattaaaggtattagtgagctcactgagtcgctcgaccaagatgcaagg
ttgcaggtcgtcgataccgttgttgaggtgctcattcaagtattgccagaatccaaggct
gcaaaagttgactctaagcacattgaaaacctctgcgctcaagtctgcggctctatcatt
acctctcatgtattcctcaaaaagccggaactagcgtcatcgatagtgtcaactttggag
gatgagaaattcgttgagtga
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