Wallemia ichthyophaga: J056_004842
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Entry
J056_004842 CDS
T03457
Name
(RefSeq) Splicing factor U2AF-associated protein 2
Organism
wic
Wallemia ichthyophaga
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
RRM_1
Pre-SET
RRM_7
Motif
Other DBs
NCBI-GeneID:
20377794
NCBI-ProteinID:
XP_009268307
UniProt:
R9AFX5
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MTSDTPNFDDPRISFDKAKQNWVLEGDDGSEMEWDVKFQRFVSVADLDQLSAQQAAYGVS
GVDESTPADVVARRHEKKRKDFTSNKPNDSNAKRDKPPPPKTAVFVTGLPPDVTVDEIAD
VFSKYGVLLTNDDGSPKVKLYTDDLGNFKGEALVVYYKQDSVSLAVQLLDDTELRYGDGS
AIRVSVADFKPEASDHTNSKHTTQKPAKPLTEEEKRRKQTKFRKLDEKLNDWDSEDESGL
ADRLPSNTTSRVVVLRHMFTPGELKEDPTLLLDLKQDVREDAEQIGKVTSVVLYDAEPDG
IMTVKFSDHIAAQACVLKYEGRYFAGRRVVSYLYDGKETFKTTESTNKYTETAEQDEQHR
LNDFVMMESMDADETSLFPSEDELEMESIEMAVLPQPTAQAPSAPSAPSPPTSTRPVQPG
GVIYQQKSSDKLRGLFHTGSTPTSTAIRKKSEKRLLSIDNNSNKKFKRKRRDGFSGGFSA
TSGTSANSPTSINTSDDFVTRSRKSLRESPSPSPSPSQLSKRSRTQPRETENKSDNTRPL
IHAMHASERKNLATPVHPINPINPTMSSADSSHESLLPKKSPLPPIKKGSLPSFRGVRDF
RPDTANNHSTPQKVSKSEQEKEREKEKPKLINNMRQTEVKLQKSQRRPQPKSKPQLQPHP
QPHNVDEEIKMSRDFTRDLGRNLSRNLSKTLSRDLGKNLNSNIIELSSDSENEVEATTKA
IPSSSSSCSPPTSIPERSSTGHRKKTRKYSPPETKPVLPPNYMEKPMLEECMQSMQGTNN
RKTCDSIHANTNTNTLQNGRNRICKDIKPFKQFKQPFNERMITDRVNDETIEAMLQITED
EHSFHDPNASFEQRKRAQLVTLERESRVNTTQVIEGPAKKPATIEQIIKPVFINMPREQR
EAYKRYDDKQYSQEEIDKASELEAWKLAEKPDKFVGLKFVGSLRRHPRTGEVLNSKSLEH
TFLAHIEQAETLMDNRNTFSIRNDVDSDPCPPVEFIYNNKPCYGSGVPKNNEKGQRRCGC
NGKCDPSTCECFQRQKYIFEGFCDRYCAYDDDGLLNTRDLPIFECNELCGCDDSCQNKVT
SKPTNFNLEIFKKEKMGWGVRTRRKIQKGQFIAVYSGEYITNDMAIHRSDIYDKVNRKYD
FDIDFYHLRNKKMYAKATQCNKKRFEKLSEDSGDVLGNTSTGTANEAGRPLQSLISPQKE
LQQYRDIDFDLQSYYTIDAFFIGNFTRFINHCCKPNLIVQPVYTVQTSVDLPFLGFYALR
DIRENEELSISYMGVDSDEEDVEQALSRKKKKTKIRSKKAKRVLDDDDSILEEAVPECFC
GAPNCRGKLFNTQNNVVDK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgacacaccaaatttcgatgatccgcgtatttcctttgataaagcaaaacag
aattgggttttggagggcgatgatggcagcgagatggagtgggatgttaaatttcaacga
ttcgtttctgtggctgatttagaccaattatctgctcaacaggctgcttacggtgttagt
ggcgttgacgagagcactccggcagacgtcgtagccagacgacacgagaagaagcgcaag
gatttcacatcgaacaagcccaacgatagtaacgccaaaagagataaacctcctccacca
aaaactgctgtcttcgtcactggcctccctcctgacgtcaccgtcgatgaaattgcagac
gtcttctccaagtacggcgttctcctcaccaacgacgatggcagcccgaaagtaaagctt
tatacagacgatcttggtaatttcaaaggtgaggctttggtggtgtattataagcaggac
agcgttagtcttgccgtgcaactactcgacgataccgagcttaggtatggcgatggcagt
gctattagagtctctgtcgcagatttcaagcctgaggctagtgatcacaccaatagcaag
cacaccacacagaaacccgctaaacctctcactgaagaagaaaaaaggaggaaacagaca
aagttcaggaaattggatgagaaacttaacgattgggatagcgaagatgagtctggcctg
gctgatcggttgccctcgaatactacctcaagagtcgtcgtactgaggcatatgtttact
cccggtgaactgaaagaggatccaacgctgttgctcgatttgaagcaagatgtacgcgaa
gacgccgagcaaattggaaaggtgacaagcgtggtgctttacgatgctgagccagatgga
atcatgactgtcaagttctcagatcatatcgcagcacaggcgtgtgtgttgaaatacgaa
ggtagatactttgcaggcaggagagtggtcagctacctctacgatggcaaggagacgttt
aaaaccactgaaagcaccaacaaatacactgagacagctgaacaagacgagcaacacagg
ttgaatgactttgtcatgatggaatcgatggacgccgacgagacgtctttattcccaagt
gaagatgagttagagatggagagtattgagatggccgtgttaccgcagccaacagcacaa
gcgccatctgcgccatctgcgccatctccaccaacttcaacgcgacctgttcaacctggc
ggcgtaatataccagcagaaatcaagcgataagctgagaggattgtttcatactgggtcc
acaccaacaagcacggcgatcaggaaaaagtccgagaagcgcctcctctctatcgataac
aacagcaacaagaaatttaagagaaagaggagagacgggtttagtggtggcttttctgcc
acttctggcacatcagccaactctcccacttcaattaacacgtctgacgactttgtcacc
cgctcgcgcaagtcgctcagagaatcgccatcgccgtcgccgtcgccgtcgcagctttct
aaacgttctcggacgcagcctcgtgagacggagaataagagcgacaatacacggccattg
atacacgcgatgcacgcgtcggaaaggaaaaatctcgctactcccgttcaccccatcaac
cctatcaaccccactatgagctctgccgacagctcgcatgagtcgctgctgccaaagaaa
tcccctctccctcctatcaagaaaggatcattacctagcttcagaggcgtgcgcgacttc
agacctgacaccgccaataaccactccacaccgcagaaggtgagcaagagcgagcaggag
aaggagagagagaaagagaaacccaaactaatcaataatatgcgacagactgaagttaag
ttgcaaaaatcacaacgacggccgcaaccaaaatcaaaaccacaactgcaaccacacccg
caacctcacaatgtggatgaagagataaagatgagcagagatttcaccagagatttgggc
agaaacttgagcagaaatttgagcaagacgttgagtagagacttgggcaaaaacttaaac
agcaacattatagaattatcctctgatagcgaaaatgaggtggaggccactacaaaagcc
atcccatctagctcttcgtcttgctctccaccgacgtctatacctgagcgttcttcgacc
gggcatagaaagaagacacgcaaatactctccacctgaaacgaaacctgttctcccacca
aactacatggagaagcccatgttggaggagtgtatgcagagtatgcaaggtacgaacaac
aggaaaacgtgcgactcaatacacgccaacactaataccaatacactccaaaatggtcgc
aacagaatatgtaaagatatcaaaccattcaagcaattcaagcagccgttcaatgagcgg
atgatcaccgatagagtcaatgatgagacgatcgaagcgatgctacagataacggaggat
gaacacagtttccacgaccccaatgcatcgtttgagcagcgaaaacgcgctcagctggtg
acacttgagcgagaatcacgcgtaaacacaacccaagtcattgaaggccctgcaaaaaaa
ccagctacaattgaacaaatcatcaaacccgttttcatcaatatgccacgtgagcagcgg
gaggcatacaaaagatatgacgataagcagtatagtcaggaagaaatagataaagcgtcg
gagcttgaagcgtggaaattagccgagaaacctgataaatttgttgggttgaagtttgtc
ggtagcttaagaaggcatcctagaacaggagaggttttgaacagcaaatccctcgagcat
acattcctcgctcatatagagcaggctgagacacttatggataacagaaacacattctca
attcgtaatgatgttgacagcgatccttgtccgcctgtcgagtttatctacaacaacaaa
ccatgttatggcagcggtgtgcccaagaacaacgaaaaaggtcaacggcggtgtggatgc
aatggtaaatgcgatccgtcgacatgtgaatgtttccagcgccagaagtacatctttgaa
ggcttctgcgatcgttattgtgcatacgacgatgacggactgctaaatacaagagacttg
ccgatattcgaatgcaatgagctttgcgggtgtgacgatagctgtcagaataaagtcact
agtaaaccgaccaacttcaacttggaaatattcaagaaggagaagatgggatggggtgtg
cggactcgaagaaagatacagaaaggacagtttattgctgtgtactctggagaatatatc
acaaacgatatggctatacatagatcagatatatatgataaggtcaaccggaaatacgat
tttgatatcgatttttaccatctgcggaataaaaaaatgtatgctaaggcaacgcaatgc
aacaagaagcggtttgagaaactgagtgaagatagtggcgatgtacttggtaatacaagt
acaggtactgccaacgaagctggcagaccacttcagtcgctcatcagcccgcagaaggaa
ctgcaacagtaccgtgatattgactttgatttacaatcctattacaccattgatgccttt
ttcatcggaaatttcacccgatttatcaaccattgttgcaagcctaatttaattgtgcag
cccgtctacactgtgcaaacctcggtcgatcttcctttcttgggattctatgccttgcgg
gatatcagagaaaacgaggagctgtctatatcatacatgggtgtcgacagcgacgaagag
gatgttgagcaagcactcagcaggaaaaagaagaagacaaagataaggtcaaagaaggca
aagagagtcctagacgatgatgacagtatcttagaggaagccgtaccagaatgtttctgt
ggggcaccgaactgtcgtggtaaactgttcaacacgcaaaataatgtagtcgataagtag
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