Winkia neuii subsp. anitrata: PIG85_06615
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Entry
PIG85_06615 CDS
T08771
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wne
Winkia neuii subsp. anitrata
Pathway
wne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIG85_06615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wne03019
]
PIG85_06615
Messenger RNA biogenesis [BR:
wne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PIG85_06615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
DUF1732
Motif
Other DBs
NCBI-ProteinID:
WCE45339
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Position
complement(1404335..1406026)
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AA seq
563 aa
AA seq
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MNSLYPDLPTPPKLAKDTLRVTPLGGLGEVGRNMTVFEINGKLLIVDCGVLFPEEIQPGV
DLILPDFSAISNRMDDVVGLVLTHGHEDHIGAVPYLLRLRRDIPIYGSRLTLAFLEPKLA
EHRLRDTNLNVVAEGDTVQIGGFGCEFVAVNHSIPDALAVMIRTEAGNALVTGDFKMDQL
PLDRRITDLRSFARLGEEGVDLFMVDSTNAEVPGFVTHEREIGPVISAVFGKAQGQLIVA
SFSSHVHRVQQVLDAAAEHGRKVAFVGRSMERNMRIAMELGYLNAPEGVIVSSREIENLP
PRQRVYMATGSQGEPMAALARIANGTHKFISVGPEDTVILASSLIPGNENSVYRVINALM
RLGTKVVHKGNAKVHVSGHAAAGELLYCYNVVQPKNVMPIHGEIRHLVANGRLAVQTGVP
ASRIALAEDGVVVDLANGQASVVGAVPCDYVYVDGGSIGEISESELHDRLVLGEEGFVSV
FAVVDLEMGQVLAGPHITARGMAEDEAVFREVLPDVAEALAKAAAPGHVDAYSLQQAMRR
ALGRWVSRRLRRRPMIVPVVIEG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgaattctctttaccctgacttacccaccccgccgaaactggccaaagacaccctgcgc
gtaactccgctgggcggcctaggtgaggtcggacggaacatgaccgtattcgagatcaac
ggcaaactattgatcgtcgattgtggcgtactgtttcctgaagaaatccagccgggtgta
gacctgattcttccggacttttcggcaatctctaacaggatggatgacgtggtggggctt
gtgctcactcacggccatgaggaccacattggcgcggtcccgtacctgttgcgtttgcgc
cgcgacatcccgatctacggctcgcgcctaactcttgcgttcttggaaccgaagctggca
gaacatcggctgcgcgacacaaacctaaacgtggttgccgagggcgacaccgttcagatc
ggcgggttcggctgcgaatttgttgcagtaaaccactccattccggatgcgcttgcagtc
atgatccgcaccgaggccggaaacgccctagttacgggcgacttcaagatggaccagctg
cccctagatcgccgtattacagacctgcgttccttcgcccgtcttggcgaagagggcgta
gacctgttcatggtggattcgaccaacgctgaagtgccgggatttgttacccatgagcgc
gagatcggacccgtcatcagtgcggtgttcggcaaagcacaggggcagctgattgtcgcc
tcgttcagttcgcatgtgcaccgtgtccagcaagtactagacgctgctgccgagcacggt
cgcaaggttgcctttgtggggcgctctatggaacgcaacatgcgtattgcgatggagctg
gggtacctgaatgctcccgagggcgtaatcgtttcttctcgcgaaattgaaaacttgccc
ccacggcagcgggtctacatggccacgggttcgcagggcgagcccatggcagctctggcc
aggatcgccaacggcactcacaagttcatctcggtaggtcccgaggacactgtcatcttg
gcgtcctcgttgatccccggaaacgaaaactccgtatatcgcgtaatcaatgctctgatg
cgcctaggtaccaaggttgtgcacaagggcaacgcaaaggtgcacgtatctggacacgcc
gccgcaggggaattgctgtactgctacaacgtggttcagccgaagaacgtgatgccgatt
cacggcgagatcagacacctcgtggcaaacggccggctggctgtccaaacgggagtgccg
gcgtcgcgcattgccctggcagaagacggggtagtagtcgacctcgccaatgggcaagct
tccgtagttggcgcagtgccctgtgactacgtgtacgtagacggtggttcgatcggcgag
atcagtgaaagcgaactgcacgatcggctagtgctcggcgaagagggctttgtcagcgtc
ttcgccgttgtcgacctcgaaatggggcaggtcctggcgggcccgcacattaccgctcgc
gggatggccgaggacgaagctgtgtttagggaagtgctccccgatgtggcagaggctctt
gcgaaggcggcagcaccggggcacgtggacgcttactcactgcagcaggccatgcgacgc
gccttgggacggtgggtttcccgcaggctgcggcgacgcccaatgattgttcccgtggtt
attgaagggtaa
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