Woeseia oceani: BA177_00465
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Entry
BA177_00465 CDS
T04427
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
woc
Woeseia oceani
Brite
KEGG Orthology (KO) [BR:
woc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
woc03032
]
BA177_00465
03400 DNA repair and recombination proteins [BR:
woc03400
]
BA177_00465
Enzymes [BR:
woc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BA177_00465
DNA replication proteins [BR:
woc03032
]
Prokaryotic type
DNA Topoisomerases
BA177_00465
DNA repair and recombination proteins [BR:
woc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BA177_00465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
RNA_pol_Rpc4
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ANO49890
UniProt:
A0A193LBI4
LinkDB
All DBs
Position
complement(112445..114949)
Genome browser
AA seq
834 aa
AA seq
DB search
MSRNLVIVESPAKAKTISKYLGKDFDVLASYGHVRDLVPKEGAVDTDADFAMKYQIIERN
EKHVNAIIKALKKSDALYLATDPDREGEAISWHLVELLKEKGVIKDKPVHRVVFHEITKG
AINEAIEHPRMISDELVCAQQARRALDYLVGFNLSPLLWKKVQRGLSAGRVQSPALRMIV
ERELEIEAFKAREYWTIEADVSKESQPFVSRLIRYRGEKVEQFSFENEAAAREVESTLLA
AANGTLTAVKVDKKQRRRNPSAPFTTSTLQQEASRKLGFNTQWTMRVAQRLYEGIELPGE
GNVGLITYMRTDSVTLAQSALDEIRDLIGERYGAQNVPAEARVFKTKAKNAQEAHEAIRP
TSVAITPESLKGKLDEEQLKLYTLIWQRTMACQMVPAIFDTVALDLAAGPHSDKGHLLRA
NGSVLVEPGFMAVYQEGKDDNETDDGDRLLPEISQGDTISLDKLRPEQHFTEPPPRFTEA
SLVKTLEEYGIGRPSTYASIIMTLKNREYVEMDGKRFLPTDIGRIVNGFLTEHFTQYVDY
DFTARLEDDLDEVSLGKKEWIPLLKEFWAPFSKLVLHKDENVTREQVAMARELGTDKKTG
KPITVRMGRFGPFVQIGTKDDEEKPKFAGLRPGQKMNDITLDEAMELFKLPRKLGETADG
LSVSASVGRFGPYVRYGDKFVSIKGDDDPYTIELPRALELIEEKKRIDAERLILDFEEEG
IQVLNGRYGPYITDKKKNARVPKDREPKTLTLDECKELLAAAPERGRRGKKKKVSASEAS
SKKTATKKKAKKKTKKKAKKKAKKKTAKKKVAKKTAPAAKKKKTTGKSTDGAEG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaaatcttgtcatcgtcgaatcaccggctaaagccaaaaccatcagcaagtac
ctgggcaaggacttcgatgtactggcgtcgtacggccacgtacgtgacctggtgccgaag
gaaggtgctgtcgatactgacgccgacttcgcgatgaaataccagatcatcgagcgcaac
gaaaagcacgtaaacgcgatcatcaaagccctgaagaagtccgacgccctgtacctcgcg
actgaccctgatcgcgaaggtgaagccatttcatggcatctggtcgagcttctgaaagaa
aaaggcgtcatcaaggacaagccggtccaccgcgtggtttttcatgaaatcaccaaaggt
gcgatcaatgaagcgatcgaacacccgcgcatgatctcggacgaactcgtttgcgcacag
caagcgcgccgtgcactggattacctcgtcggcttcaacctgtcgccgctgctatggaaa
aaagtacagcgcggcctgtcggcgggccgggtacaaagccctgcgctgcgcatgatcgtc
gagcgcgagctggaaatcgaagcattcaaggcccgggaatactggacgatcgaagctgac
gtcagcaaagaatcgcagccgttcgtttcccggctcattcgctaccgcggcgaaaaagtt
gaacagttcagctttgagaacgaagccgcggcccgcgaagtcgaaagcaccctgctggct
gccgccaacggtacgcttaccgccgtaaaggtcgacaagaagcaacgacggcgcaacccg
tcggcgccgtttacgacctcaaccttgcagcaggaagcgtcccgcaagctcggcttcaat
acgcaatggaccatgcgcgtcgcgcaacgcttgtacgaaggtatcgaactgccgggtgag
ggcaatgtcggtctcattacctacatgcgtaccgactcggtcacgctggcgcagtccgct
ctcgatgaaattcgcgacttgatcggcgaacgatacggtgcgcagaacgtaccggctgaa
gcgcgcgtctttaagaccaaggcgaaaaacgctcaggaagcgcacgaggccattcgcccg
acgtctgtcgccattacgcctgagtcactcaagggcaagctcgacgaagaacaactcaaa
ctctacacactgatctggcaacgcacgatggcctgtcagatggtgcccgcgattttcgac
acggtagcgctggatctggccgccggaccgcacagtgataaaggtcacttgttgcgtgcc
aatggctcggtactggtcgagcccggctttatggcggtataccaggaaggcaaggacgac
aacgaaaccgacgatggcgatcgcctgctccccgaaatcagccagggcgatacgatttcg
ctcgacaagttgcgccccgaacagcatttcaccgaaccaccgccgcgattcacagaggcg
agccttgtaaagacgctggaagaatacggtatcggccggccctcgacctacgccagcatt
atcatgacgttgaagaatcgcgagtacgtcgaaatggatggcaaacgtttcctgcctacc
gatattggccggatcgtgaacggcttcttgaccgaacacttcacgcagtacgtcgactac
gacttcacggcgcggctcgaagacgatctcgatgaagtgtccttgggcaagaaagaatgg
ataccgttgctcaaagaattctgggcaccgttttccaagctggtattgcacaaggacgag
aacgtaacccgcgaacaagtcgcgatggcccgtgagttgggtaccgacaagaaaaccggc
aaacccatcactgtccgcatggggcgatttggcccgttcgtacaaatcggcaccaaagac
gacgaagaaaaacccaaatttgccggactgcgccctggccagaagatgaacgacatcacg
ctggatgaggcgatggagctgttcaaactgccgagaaagctgggcgagacagctgacggt
ctttcggtttctgcaagcgttggccggttcgggccttacgtgcgttacggcgacaagttc
gtctcaatcaaaggtgacgacgatccgtacaccatcgaactaccgcgcgcgctggagctg
atagaagagaaaaagcgcatcgacgcagaacgccttattcttgatttcgaagaagaaggc
attcaggtactgaacggtcgctacggtccgtacatcacggacaaaaagaagaatgcacgg
gtgccgaaggaccgcgaaccaaagacactgacgctcgacgagtgcaaggaattgctggcg
gcagcgcccgagcgcggccgacgcggcaaaaagaaaaaagtcagtgcgtcagaggccagc
agcaagaaaacggcaactaagaaaaaagccaaaaagaagaccaagaagaaagccaagaaa
aaggccaagaaaaaaacagccaagaaaaaagtcgcgaagaagacagccccggcagccaag
aaaaagaaaacgacgggcaagtcgactgacggcgcagaaggttag
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