Wallemia mellicola: WALSEDRAFT_62616
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Entry
WALSEDRAFT_62616 CDS
T03142
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
wse
Wallemia mellicola
Pathway
wse03013
Nucleocytoplasmic transport
wse03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
wse00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
WALSEDRAFT_62616
09122 Translation
03013 Nucleocytoplasmic transport
WALSEDRAFT_62616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wse03019
]
WALSEDRAFT_62616
03041 Spliceosome [BR:
wse03041
]
WALSEDRAFT_62616
Messenger RNA biogenesis [BR:
wse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
WALSEDRAFT_62616
Spliceosome [BR:
wse03041
]
Complex C
Other components
EJC/TREX
WALSEDRAFT_62616
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
WALSEDRAFT_62616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
18474767
NCBI-ProteinID:
XP_006956634
JGI:
Walse1_62616
UniProt:
I4YH01
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDDIKASLVGLTRGENKLENLRNAIDNSQLPIDDKKALVEATIREEIQSYSTTRSIAPQY
SDDKVTDPYHTGLLSKLGILVDLLKSEMITPNSVVPIISDTLDIHPLSSATVIFSFLTNF
MSSDDSNQVKTISTRNNLLKTSNELLRRASRTRNSELCGEILLFLTSIMPLTDRSATNFR
GDIRESNKTFINDLIDSPDADDSYKDFWRLQSYLTDPMSIYNGGLVKNDDKEVTHIESFK
QLFSNILDLLVQASDKEIKMSGSKLKKDTKRKADELEAKSDNHESNDAYFFPEYLAQPKL
FPLQVADPSFRCCVFIQMFIIVQFIVSVYPKELLKAPEIKNPQEKIIKSGIQSDKPLYDW
ASNKRAILLKSLPKVSPNNLDITQPIVQLMKREKHWVYWKMENCPMIELPRDDPELLNKA
EESRISNIFKSLNPNPYTWGTESLSESFEEGYQDERDLEFYPRAPELKHYVNMAKLDTMK
AKKRKTMLGLDDNADSSGDLELEELKSHKQSLSWRGFRCVARSNAPIIASLPPGSDVEGL
QAAIEKRKQAQAQKAASKESSPAITTAAEIVDDGQRQEQTEQAELDAESAKKPANGSQNK
EEVDEQDIVEQQLIEDEMKDQKERPEEAPVVQPTMDVQEEAPNDSSQQVEDTPSDEAMKD
EPIEESTEKPEVEVVAAPAEATEMKIDEE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatcaaggcatcactcgtcggcttaactagaggcgaaaataagctagaaaat
ctcagaaatgctatagacaacagtcaattaccaatagatgacaagaaagcgcttgtagag
gccactatcagggaagaaatacaatcgtattctacgacacgatcaatagcacctcaatac
tccgatgataaagtcacagatccatatcacaccggtttgctttcaaagttgggtatttta
gtcgatttactcaagagcgaaatgattacaccaaattcagtagtaccaatcatctccgat
acactagatatacaccctctatcatcagctactgtcattttctcattcctgaccaacttc
atgtcttccgacgattccaaccaagtgaaaacgataagtacgcgaaacaacctcctcaaa
accagcaacgagctgttgaggagagcatcacggactagaaacagtgaactatgcggtgaa
atcttgctcttcctcaccagtattatgccattgacggatagatcagctacaaacttcaga
ggagatatcagagagtcaaataaaacattcataaatgatcttatagacagtccagatgct
gatgatagctataaggatttttggcgtctgcaatcttaccttacagacccaatgtctatt
tataatggcgggttagtgaaaaatgatgacaaggaagtcacgcatatcgaaagtttcaaa
cagctgttcagcaatatattagatcttctcgttcaagcatcagataaggagatcaaaatg
tctggatcaaagttaaagaaggacacgaagaggaaagcagacgaactcgaggccaaatca
gacaatcatgagtccaatgatgcatacttcttcccggagtatctcgctcaaccaaaacta
ttcccattacaagttgctgatccaagcttcagatgctgtgtgttcatacaaatgttcatc
attgtccaatttatagtctccgtataccctaaagagcttctcaaagcgccagaaatcaag
aacccacaggagaaaataataaagagcggcatacaatcggacaagccactttatgattgg
gcatctaataagcgagcaatattgcttaaatcattaccaaaagtttcacccaataatctt
gacattacccaaccaattgtacagcttatgaaaagggaaaaacattgggtttattggaag
atggaaaattgcccaatgattgagttaccaagggatgatccagaattgctcaataaagct
gaagaatcaagaatatcaaacattttcaagagcttaaacccaaatccatacacttggggt
acagagtcgcttagtgaatctttcgaagaaggatatcaagatgaacgagatttggagttc
tacccacgcgcacctgaactcaagcactatgtaaatatggcaaaattggatacgatgaaa
gccaaaaagagaaagactatgttaggtttggatgataatgctgatagctctggagatctt
gagttagaagagctaaaaagtcacaaacagagcttgtcatggcgtgggtttagatgtgta
gcacgaagcaacgcacctataatagcttctttaccacccggatctgacgttgaaggcctc
caagcggctattgagaagaggaagcaagctcaggcacagaaagctgcatcaaaggaaagc
tcaccggctatcacgacagctgcagagattgtcgatgatggtcagcggcaagaacagact
gagcaagctgagcttgatgctgagtctgcgaaaaaaccagccaatggttcccaaaataag
gaagaagtcgatgaacaagatattgttgaacaacaactaattgaagatgaaatgaaagac
cagaaagagagaccagaggaagcaccagtagttcagccaaccatggatgtgcaagaagag
gcgccaaatgattcgtcacagcaggtagaagatacaccctctgacgaagcgatgaaggat
gagcctatagaggagagcacagagaagccggaggtggaagtcgttgcagcacctgctgaa
gctacagaaatgaaaatagatgaggaatga
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