Xanthomonas citri pv. citri 306: XAC2413
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Entry
XAC2413 CDS
T00084
Symbol
rnD
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xac
Xanthomonas citri pv. citri 306
Brite
KEGG Orthology (KO) [BR:
xac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xac03016
]
XAC2413 (rnD)
Enzymes [BR:
xac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XAC2413 (rnD)
Transfer RNA biogenesis [BR:
xac03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XAC2413 (rnD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Imm75
CHASE2
Motif
Other DBs
NCBI-ProteinID:
AAM37265
LinkDB
All DBs
Position
2813482..2814573
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AA seq
363 aa
AA seq
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MPLWITHPSELTDRLQAARPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NAALKEWLIATDIVKVMHSASEDLVTFKCACGALPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDELTRRLAEQGRLEWLAED
ADRLLATVEHDDGERWPHVSLRAAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILENE
LASQLARFPPADLEALLRQFDKFPKAPRKLANAVWDALNTPLPDEEHAPLAQAATDGNKA
VLKRLQDTVAQRSRELGLPDGLLASRRHLETLMEQRSWPAALGQWRRALLEAQLMPLLEG
TAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgcccctttggatcacccacccctccgagctgactgaccgcctgcaggcagcgcgacca
tcgcgcatcggcctggataccgaattcattcgcgaacgcacctactggccgcaactggcc
ctggtgcagatggccatcggcgaggagatcctgctgatcgacccgctgatccccggcatg
aacgcggcgctcaaggagtggttgatcgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggtcacgttcaaatgcgcgtgcggcgcattgccgcggccgttgttcgac
acccagatcgccgcggcactggccggtgtcggcggcggcatgggataccagaaactggtg
caggaagtcaccggcaccttgctgaccaagggcgaaacacgctcggactggatgcgtcgc
ccgctgtcgcctgcgcagctggaatatgccgccgatgacgtgcgctatctgtttgcgatc
cacgacgagctcacgcgccgcctcgccgagcaaggccgtctggagtggctggccgaagat
gccgaccgcctgctcgccacggtggagcacgacgatggcgagcgctggccgcatgtgagc
ctgcgcgcagcacagttcctggaaccggccgcgcaacgacggctgctgcgcttgctgcgt
tggcgcgacctgcaggcgcggcagagcgatcgcccgcgcagctggatcctggaaaacgaa
ctggccagccagctggcgcggttcccgcccgccgacctggaggccttgctgcgccagttc
gacaaattccccaaggcgccgcgcaagctcgccaacgcggtgtgggatgcactcaacacc
ccgctgccggacgaagagcacgcgccgctggcgcaggccgccaccgacggcaacaaggcc
gtactcaagcgcctgcaggacaccgtggcgcagcgtagccgcgaactcggcctgccggac
ggcctgctggcctcgcgccgccacctggaaaccttgatggaacagcgcagctggcctgcg
gcgctgggccaatggcgccgtgccctgctggaagcacagttgatgccgctgctggaaggc
acagcagcgtag
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