Xanthomonas sp. GW: HEP73_01526
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Entry
HEP73_01526 CDS
T08755
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xag
Xanthomonas sp. GW
Pathway
xag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP73_01526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xag03019
]
HEP73_01526
03009 Ribosome biogenesis [BR:
xag03009
]
HEP73_01526
Enzymes [BR:
xag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HEP73_01526
Messenger RNA biogenesis [BR:
xag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEP73_01526
Ribosome biogenesis [BR:
xag03009
]
Prokaryotic type
rRNA helicases
HEP73_01526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
adh_short
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QNH20626
UniProt:
A0A7G7SV56
LinkDB
All DBs
Position
1842507..1844516
Genome browser
AA seq
669 aa
AA seq
DB search
MSQDTPAPLLFADLGLSPAVMKAVADVGYESPSPIQAATIPALLTGRDLLGQAQTGTGKT
AAFALPILSRLDFNQRKPQALVLAPTRELAIQVAEAFHRYAGAIPGFQVLPVYGGQPYVQ
QLSALKRGVHVVVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIDDVEAVLKKL
PVSRQVALFSATMPTAIKRIAQTYLNDPAEVIIASKTTTSANVRQRYWAVSGLHKLDALT
RILEVEPFDAMIVFARTKAATDELAQKLQARGLAAAAINGDIQQSQRERVIQQLKDGKLD
ILVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPREKGML
RAIERATRQPIEEMQLPSVDAVNDQRVTRFMEKISETIAGGGIDTYRDLLQRFETEKNVP
MVEVAAALARLLQGDTPLLLAPERARPPQGERFERPGAERRERADRGERTERPKFEPKFD
REARPPRRDEGERAPPRAPRPAPAGHGPDYDYQRDVGSFEAPRRDKAPKAPRGEPEVGME
TYRIEVGHQHGVKPANIVGAIANEAGLESKYIGRIDIHDDHSVLDLPADMPRELLTHLKK
VWVSGQQLQMRKLDGDDAGASAPFKPKFARAAGKPGGRPNAAGPRPAGAATRMADKAGDR
PPRKGPPKR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagatacccccgcgccgctgctgttcgcagatctcggcctctcgcctgctgtg
atgaaagccgtcgccgatgtcggctacgagtcgccgtcgccgatccaggccgccaccatt
cccgcgctgctgaccggccgcgacctgctcggccaggcccagaccggcaccggcaagacc
gccgcgttcgcgctgccgatcctgtcgcggctggacttcaaccagcgcaagccgcaggcg
ctggtgctggcgccgacccgcgagctggcgatccaggtcgccgaggcgttccatcgctac
gccggcgcgatccccggcttccaggtgttgccggtgtacggcggccagccctatgtgcag
cagttgtcggcgctcaagcgcggcgtgcacgtggtggtgggcacccccgggcgggtcatc
gaccacctggagcgcggcaccctggatctgtcggagctgaagacgctggtgctcgacgag
gccgacgagatgctgcgcatgggcttcatcgacgacgtcgaggcggtgctgaagaagctg
ccggtctcgcgccaggtggcgctgttctcggcgaccatgccgaccgcgatcaagcgcatc
gcgcagacttatctaaacgatccggccgaagtcatcatcgcctccaagaccaccacgtcg
gcgaatgtccgccagcgttactgggcggtcagcggcttgcacaagctcgatgcgctgacc
cgcatcctggaagtggagccgttcgacgcgatgatcgtgttcgcgcgcaccaaggccgcc
accgacgagctggcgcagaagctgcaggcgcgcggcctggccgccgcggcgatcaacggc
gacatccagcagtcgcagcgcgagcgggtgatccagcagctcaaggacggcaagctcgac
atcctggtcgccaccgacgtggccgcgcgcggcctggacgtggagcggatcagccacgtg
ctgaactacgacatcccgtacgacaccgaaagctacgtgcaccgcatcggccgcaccggc
cgcgccggccgcagcggcgaggcgatcctgttcgtcagcccgcgcgagaagggcatgctg
cgcgcgatcgagcgcgccacccggcagccgatcgaagagatgcagctgccgagcgtggac
gcggtcaacgaccagcgcgtgacccgcttcatggaaaagatcagcgagaccatcgccggc
ggcggcatcgacacctaccgcgatctgctgcagcgtttcgagaccgagaagaacgtgccg
atggtcgaagtggccgcggcgctggcgcgcctgctgcagggcgacacgccgctgctgctg
gcgccggagcgcgcgcgtccgccgcagggcgagcgcttcgagcggcccggtgccgagcgc
cgcgagcgcgccgaccgcggcgagcgcacggaacgtcccaagttcgagcccaagttcgac
cgcgaagcgcgcccgccgcgccgcgacgaaggcgaacgcgcgccgccgcgtgcgccgcgt
cccgcgccggccgggcacggccccgactacgactaccagcgcgacgtcggcagcttcgag
gccccgcgccgcgacaaggcgcccaaggcgccgcgcggcgagccggaagtgggcatggag
acctaccgcatcgaggtcggccaccagcacggggtcaagccggccaacatcgtcggcgcg
atcgccaacgaggccggcctggagagcaagtacatcggccgcatcgacatccacgacgac
cattcggtgctggacctgccggcggacatgccgcgcgagctgctgacccacctgaagaag
gtctgggtctcgggccagcaactgcagatgcgcaagctcgacggcgacgacgcgggcgcc
agcgcgccgttcaagcccaagttcgcgcgcgccgccggcaagcccggcggccgcccgaac
gcagccggtccgcgcccggccggcgccgccacccgcatggccgacaaggccggcgatcgc
ccgccgcgcaagggtccgccgaagcgctga
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