Xanthomonas albilineans: XALC_0612
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Entry
XALC_0612 CDS
T01160
Symbol
dnaX
Name
(GenBank) probable dna polymerase III tau and gamma subunits protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xal
Xanthomonas albilineans
Pathway
xal03030
DNA replication
xal03430
Mismatch repair
xal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XALC_0612 (dnaX)
03430 Mismatch repair
XALC_0612 (dnaX)
03440 Homologous recombination
XALC_0612 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xal03032
]
XALC_0612 (dnaX)
03400 DNA repair and recombination proteins [BR:
xal03400
]
XALC_0612 (dnaX)
Enzymes [BR:
xal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XALC_0612 (dnaX)
DNA replication proteins [BR:
xal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XALC_0612 (dnaX)
DNA repair and recombination proteins [BR:
xal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XALC_0612 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
ResIII
PIF1
DUF3646
AAA_18
AAA_7
AAA_19
Mg_chelatase
DNA_pol3_delta
nSTAND3
AAA_2
TsaE
AAA_24
AAA_assoc_2
TniB
SKI
Motif
Other DBs
NCBI-ProteinID:
CBA15131
UniProt:
D2UCC0
LinkDB
All DBs
Position
658808..660643
Genome browser
AA seq
611 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGKCAACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
MQIQGQMTKILAAEQIEVDASAIVQLAKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLDALVDADGARLLQVVAGLAEFSPDWGGVLEALAETLHRIQVRQLVPG
AALDTLDGLDLAPLAERLRPEIVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPA
NAAALPAASAAGAPAQEQHGATSAASAAPAASPSTVAAVTPSASIMSPTPTVVQTSTNAS
ATALDPPWDPPAPSPARPAAPAAPMPTTTRPPLVSAPEADTVPPPAEAPRASSPTAVGAR
GLHSTEDWLALVADCGLTGPSRQLAANAAFVSHAQSVLRLSLSPGFEYLQSDRSLGELAE
ALAEALGQRPKIVIESGIAVDTETLHERSHRQRGERQNAAEAAFLNDPAVQALMQQQGAR
VVPDSIRPYDE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaagtggcgccccaagcgttttgccgaactggtgggg
caggagcatgtggtccgtgcgctcaccaatgccctggacagcgggcgggtccaccatgcc
tttctgttcacgggcacgcgcggcgtcggcaagaccaccatcgcgcgcatcttcgccaag
tccctgaactgcgagcagggcaccagtgccgatccgtgcggcaagtgtgcagcctgtctg
gacatcgatgcaggccgctatatcgacctgctggagatcgacgctgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgaaaacgcgcaatacatgccttcgcgcggcaagttc
aaggtctatctgatcgacgaagtgcacatgctgtcgaaggcggcgttcaacgcgttgctg
aaaacgctggaagagccaccggagcacgtgaagtttctgctcgccaccaccgatccgcag
aagctgccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcgcctggacgag
atgcagatccaggggcagatgaccaagattctggcggccgagcagatcgaggtggatgcc
tcggccatcgtgcagttggccaaggccgccgacggcagtctgcgcgacggtctgtcgctg
ctcgatcaggccatcgcctacgctggcggcgcgctgcgcgaggatgtggtgcggacgatg
ctggggacggtcgatcgcactcaggtcggtgccatgctcgatgcgctggtcgatgccgat
ggggcgcgattgttgcaggtcgtcgcgggtttggccgagttctcaccggattggggcggc
gtgctggaggcgctggccgagacgctgcatcgcatccaggtacggcaactggtgccgggt
gctgcgttggatacgctggacggcctggatctggcgccgctggccgagcggctgcgtccg
gaaatcgtgcaactgtggtaccagatggcattgaatgggcgccgcgatctgtatctggcg
ccgagtccgcgcgccgggttcgagatggcggtgttgcggatgctggcgttccgcccagcg
aacgctgcggcattgccggcggcgtccgccgcgggcgcgccagcgcaggagcagcatggc
gcgacgtcggccgcttccgctgcgccggccgcgtccccgtcgacggtggcggcggtaact
ccttccgcatcgatcatgtcgccgacaccgacagtcgtccagacatctaccaatgcgtcc
gcgactgcgctggatccaccgtgggatccacccgcgccgtcgccggcacgcccggccgcg
cccgctgcgccgatgccgaccaccacgcgcccgccgcttgtgtcagcccccgaagcggac
acagtgccgccgccggccgaggcgccgcgtgcgtcatcgccgactgccgttggcgcacgc
ggtctgcacagcaccgaggactggttggcactggtcgccgactgcggcctgaccggtccg
tcacggcaactcgcggccaatgccgccttcgtcagtcatgcccagagtgtgctgcggttg
tcgctgtcgccgggtttcgaatatttgcaatcggaccgttcgctcggcgaactggccgag
gcactggccgaggcactcggccagcggccgaagatcgtgatcgaaagcggcatcgcggtc
gataccgaaaccctgcacgagcgttcgcaccgtcaacgcggcgagcgtcagaacgcggcc
gaggctgcgttcctcaacgacccggcggtgcaagcgctgatgcagcagcaaggcgcgcgg
gtcgtgcccgattccatccgtccctacgatgagtga
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