Xanthomonas albilineans: XALC_2338
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Entry
XALC_2338 CDS
T01160
Name
(GenBank) putative rhs family protein
Organism
xal
Xanthomonas albilineans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
A_amylase_inhib
Motif
Other DBs
NCBI-ProteinID:
CBA16818
UniProt:
D2U976
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All DBs
Position
2791534..2795733
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AA seq
1399 aa
AA seq
DB search
MDRFQAFSQLRACVALLTLGFVATAYADELRFDQKYIERIKQSQETARLSVDSFGEQVNL
KDGGVVFNWTDIDIAGNSKLPVRLQRSIVVEDQGVGRSGKLGGFGVGGSLDVPYLKGIFS
PDGWQVYGSSPNSRCSQPAQPPNYNQLTAVDYASGNWLHIPGSNEQQMLMDPASQLPAPG
DGTRYPWITKGFWRFSCLANTKNGYPGEGFVALSPEGDKYYFDWVVSKIHSGLSKQVGNL
NGSLSMPRLAVFFLATRVEDRFGNWVTYTYNGDQLSRIDASDGRYILVTGTSGDNITSVR
SSIGTWTYAYGDQSLVVNQPDNAQSRYVQTGLMDITPLESELFYENPPQCEPPAESAGGF
TYAVTLPSNATATYIFSVRRHFRSNIYKICNAGLVPKTQLVSYEYLTTPNFSDTFTLLSK
SISGPGLPTMQWSYTYDIGSQGGPFQQDCQRPTFQCHKYVQTEVRGPDNDFKRYTFGVLY
NVNEGWDLGVETGSITTSSSGDTANILSKSENEYIGNEEVANQPFPSFVGSGHGANSDDQ
SIAGLRPLKRTTITQDGGTFQMAVNSYDVFARPTSVTRSSAFNTRSEATAYYDNVNLWVI
GQIASVTKTAPGDAQEMYASTYDAATALPTRFSRFGKTIQSVAYNADGTVSRVNDGNGNA
TSLSGWKRGLPQGITYADGSSDSAVIDDRGLISSATDENGYTTSYTYDAMGRLTSITYPW
GDTVDWATTGLTFEQVNVAEFGLPAGHWRHTVSTGNATKITYLDGLWRPVLTQEYDAANI
DGTRRFDRFIYDHQGHTLFASYPGTSDQLSTGTWTQYNALGRPTSVSHDSEQGLLTTKTE
YLSAYQMRVTDPRGNQTLSGYQVFDQPGYDAPVWIQHSEGANTDINRDIFGKPLSIRRRN
ADGTVSVTRSYVYDTYQQLCKTVEPETGATAKGYDAAGNLVWSAAGLSLPSTSSCDADAA
FASGRRVDRSYDVRNRIKTLNFPDGNGNQTWSYWPDGLVKQITTINNGIPTYNSYTYNKR
RLLIGESQDQADGETWAMGYAYDANGHLAAHRYPSGQTVDYAPNALGQPTQAGSYATGVS
YYPNGAIKQFNYGNGIVHTLTQNARQLPDTSQDAYGGIAFLNDGYDYDAGGNVASISDGA
TGRNQRGNRNMAYDGLDRLTSAVSPMFGTASYSYDALDNLTHVVAPGRDHYYCYDVNWQL
ANVKTGGCGGSTVIGMSYDPQGNLNNKNGQGFEFDYGNRLRQATGKETYRYDGNGRRTLA
IQNAGNIGSLYDQAGALRYQKNQRQSKATDYILLGGSLVAEADWPLGQTSLVKDYLSWGA
VAGATRYLVEESVDGVTWTSIYDGNQTNWTSLARSSGSYSYRVTACTANGPCSTVPNVNY
IQGSAIDIVPLLYQLLLNS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggataggttccaggcgttttcccagttgcgtgcatgcgtggcattactgaccctaggg
tttgtggcgacggcttacgcggatgagctgcggttcgaccagaagtacatcgaacgcatc
aagcaatcgcaggagaccgcacgcctgagcgtcgattccttcggagagcaagtcaatctg
aaggacggcggggtggtgttcaattggaccgatatcgacatcgccggtaacagcaagctc
cctgttcgcctgcagcgctcgatagtggtggaagatcagggcgttgggcgtagcggcaaa
ctcggcggcttcggtgtcggcggctcgctcgatgtgccgtatctcaaagggatattcagc
ccggatggctggcaggtctacggatcgagtccgaacagccgctgcagccagccggcacag
ccaccgaattacaatcagttgaccgcagtggattacgcttcaggaaattggctgcatatt
ccgggttccaatgaacaacaaatgctgatggatcccgccagccagttgccggccccaggc
gacggcacccgctatccttggattaccaaaggtttctggcggttctcttgcctggccaat
accaagaacggctatccaggcgaaggtttcgttgcactgtcacccgaaggggataagtac
tacttcgactgggtggtcagcaagatccattcgggactttctaagcaagttggcaactta
aacggcagcttgtccatgcctcgtttggctgtttttttcctagccactcgtgtcgaggat
cgctttggcaattgggtcacgtatacctacaatggcgaccaattgtcacgtatcgatgcc
agcgatggtcgctacatcctcgtgaccggcacgtcaggagacaatatcacctcggtcagg
tccagtattggaacctggacttacgcatatggggaccagtcgctggtggtgaatcagccg
gataatgcgcagtcgcgttatgtccaaacaggcctaatggatattacccctttagagtcg
gaattattttatgagaatcctccacaatgcgaacctcctgcagagtcagcgggcggcttc
acatacgccgtgactttgccaagcaatgctacggcaacatatattttttccgtgaggcgt
cattttcgcagtaacatttataaaatttgtaacgcgggcctggttccaaaaacccagtta
gtaagttatgaatatctgactacccccaacttttcggataccttcaccctgctcagcaag
tcgatcagcggccctggcctgccgacgatgcaatggtcgtacacttacgacatcggctcc
caagggggtccgttccagcaagattgtcaacgtccgacctttcaatgccataaatatgtg
caaaccgaggtgcgcggtccggataatgacttcaagcgctatacctttggcgtcttgtac
aatgtgaacgaaggatgggatctcggtgtcgaaaccggttcgatcacgaccagctcgtcc
ggggacacagcgaatatcctgagcaaaagtgagaatgagtacattgggaatgaggaagtt
gccaatcagccgtttccaagtttcgtcggctctggtcatggagcaaatagcgacgatcaa
tccatcgcgggtctaaggccgctgaagcgcaccaccatcacccaagatggtggaactttt
cagatggcggtcaacagctacgatgtattcgcgcgcccgaccagcgtgacacgctccagt
gcgttcaatacccgtagtgaggccacggcgtactacgacaacgttaacctgtgggtgatt
ggccagattgcctccgtgaccaaaacagcgcctggtgatgctcaggaaatgtacgccagc
acctatgatgcggcgactgcactgccgacgcgcttctcccggttcggcaagaccatccag
tcggttgcctacaacgctgacggtacggtgtcgagagtgaatgacggtaacggcaatgcc
accagcctcagtggttggaagcgcggtttgccgcaaggcatcacctatgcggatggcagt
agcgacagcgcggtcattgatgaccgtggcctgatcagctcggcgaccgacgagaatgga
tatacgaccagctatacctacgatgccatggggcgtttgaccagtatcacctatccctgg
ggcgacaccgtcgactgggcgacgactgggctgaccttcgaacaagtgaacgtggccgag
ttcggccttcctgccgggcactggcggcataccgtgtcgaccgggaatgcgacgaaaatc
acctacctcgatggcctatggcggccggtgctgacgcaggaatacgacgcagcgaatatc
gacggcacgcggcgtttcgaccggttcatctacgatcatcagggacatacgctgttcgcc
tcttatcccggcacgtctgatcaattgtcgaccggaacctggacgcagtacaacgcactg
ggccggccgacgtcggtttctcatgactccgaacagggcctgttgacgaccaagactgaa
tatttatcggcctatcagatgcgcgtcaccgacccgcgcggcaatcaaacgctttccggc
tatcaggtattcgatcaaccgggctacgatgcgccggtctggattcaacactcggaaggc
gccaacactgacatcaaccgcgacatcttcggtaaaccgctgtccatccgtcgccgcaat
gccgacggcacggtatcagtgacccgcagctacgtctacgacacctatcagcaactttgc
aagacggtcgaaccggagactggcgccaccgccaaaggctacgacgctgcaggcaatctg
gtgtggagcgcggctggcctgtctttgccgagcacttcgtcatgtgacgcggatgcggcc
tttgcatccggccgccgagtcgatcgcagctatgacgtgcgcaaccgaatcaaaacgctg
aatttcccggatggcaacggcaaccagacctggagctactggccggatggcttggtcaaa
caaatcaccaccatcaataacggcattcccacctacaacagctatacctacaacaaacgc
cgcctattgatcggggaaagccaggaccaagctgatggcgagacttgggcgatgggttat
gcctacgacgccaatggccatctggcagcacaccgctatccatccgggcagacggtggac
tacgcccccaatgcactgggccagcctactcaagcgggcagttacgccacgggtgtgagt
tactaccccaacggggcgatcaagcaattcaactatggcaatggcatcgtccacacgctg
acgcaaaacgcacgtcaactcccggacaccagccaggatgcctatggtggcatcgcgttc
ctcaacgatggctacgactacgatgccggtggcaatgtcgccagcatcagcgacggcgca
accgggcgtaaccagcgcggcaaccgcaacatggcctacgatggtctggaccgcctgacc
tcggccgtatcgccgatgttcggcacagcgagttatagctatgacgcgctcgacaacctg
acgcatgtcgtggcgccgggccgggatcactattactgctatgacgtgaattggcagctc
gccaacgtcaagaccggtggctgtggcggcagcaccgtcatcggcatgagctacgacccg
cagggcaacctcaacaacaagaacggtcagggcttcgagttcgattatggcaatcgcctg
cgccaagcgaccggtaaggaaacctaccgctacgacggcaacggccgccgcactctggcg
atccagaacgccggcaacatcggatcgctgtacgatcaggctggcgcgctgcgctatcag
aagaaccagcgccaatccaaggcaacggactacatcctgcttggtggcagcttagtagcg
gaagccgactggccgctcggacaaacttccttggtcaaggattacctgagttggggcgcc
gtggccggcgcaacccgctatctcgtggaagaaagtgtggatggtgtcacttggacctca
atctacgacggcaatcaaacgaactggacctcgctggccagatcctcgggtagctattcg
tatcgcgtgacggcctgtactgcgaacggaccgtgcagtacggtgccgaatgtcaattac
attcagggatcagcgatcgatatcgtgccgttattgtatcaattgctactgaatagttga
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