Xanthomonas arboricola: XB05_16540
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Entry
XB05_16540 CDS
T06096
Name
(GenBank) hemagglutinin
Organism
xar
Xanthomonas arboricola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
OMP_b-brl
Cadherin_5
Cadherin_4
FctA
NtrZ
Motif
Other DBs
NCBI-ProteinID:
AKC81457
UniProt:
A0A0E3YRY0
LinkDB
All DBs
Position
complement(3942501..3947147)
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AA seq
1548 aa
AA seq
DB search
MSTTFAAVGGVRPLLRWILALLLLATSHVALAAYCTSPKSATINAGGSVTFDVSDCDGPS
NTGMTDDGVPPAHGSYVLSGQSGPGTQTVTYTNNGDGATSDSFYLLDEDNNQVVFNITIN
PAISASIAVSPSSANEDSGTSFTYTVTLSQTSSSATTVNLTRSGTATSGTDYTGAVASIV
VPANTASASFAITPVADTTVEADETVVISVASGSGYGIGSPSSATATIVNDDALPALSID
DVSVNEGNSGTTTATFTVSLSAASGQTVSVNYITADGTATAGSDYAARSGTLTFAPGVTA
QGVAITVNGDTAVEPNETFSVGLSGASNASIARATGTGTIVNDDVVVVVGPASLPAATAG
SAYSQTLSASGGTAPYTFAITAGALPAGLSLSAGGVLSGTPTASGGFNFTATATDSGGSP
TSGARAYTLTVAVATTTFPATSLPAGTAGQAYSSALNPATGGVAPYTYAVTAGALPAGIT
LDGSSGALTGTPSSVGSFSFSVTATDSTTGTPSQATRSYTLTIAAPPIVVAPSALPAATR
GTAYSQTLSASGGTAPYTYALASGTLPAGITLASNGTLSGTATVEGSFNFTVTATDAGSF
TGNQAYTLTVAGPNLVLPASTLPAGTAGQAYSAAITPATGGTAPYRYALTGGVLPAGVVV
DAATGALSGTPTVAGTFNFTLTVSDSTPSPAAQASRSYTLTIAAPVVVIAPTTLPAATRG
TAYSQTLSASGGTAPYTYAVSAGSLPAGITLASNGTLSGTATVEGSFNVTVTATDANTFT
ATQAYALTVAGPNLALPASTLPAGTAGQAYSAAITPATGGTAPYRYALTAGALPNGVIVD
AATGALSGTPTLSGTFNFTLTATDSTPSPAVQASQNYSVTIAAATLVLAQPTLPPAVRGS
AYNQVLTASGGVAPYRYSIASGTLPAGLTLASDGTLSGTPTTQGTSSFTIAVADAGNASA
TQAYSFTVSDAAPVAVADVAATMSDAAVTVAVTANDTGNITAVAIAAAPTNGTAVVNGLE
LVYTPAAGFVGTDVVSYTVTGSGGTSAAATVTIAVNARPVAVSVTAAAVPGEAQQVDLTR
NATGGPFVAAAVVAVLPASAGTATITQVGGLATAAAARASGPSPAAAAMAETPTFMLTFT
PNPAFVGQATVQFTLSNAFATSVPANVVFTIAPRRDPSVDAEVRGLIDAQSESTRRFARA
QIDNFQRRLEATHRGGSTFSNAVSFQPTSHCRQADRGISAQPCSPDTQEADNDFRDAPAV
ASSGTSTAQGQGDLGLWVGGAIRSGSLDKQSNSNGVDFQTDGLSVGADYRVAQSLAIGAG
LGWGRDDSDVGRNGSHSKATAYTMALYASFHPGKAFFFDTLVGYQLLSYDLRRYVTDDAS
MAEGNRDGKQWIASLSTGADLQRGELQITPYARVDVARATLDGYVEDGVAPFALRYDDMD
VATTTGNLGLRLEWRREVAWGRLTPQLRVEYQRDFQGRGDATLSYADLNGGPFYRAGQSA
FDRNRLMVGIGAALLTEQGLSTRLEYRGITYGDSNNDQTWMINLEKKY
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaccttcgccgccgtgggtggcgtgcgtccgctgttgcgctggatattggcg
ctgttgctgttggcgacctctcacgttgccctggcggcctattgcacaagcccgaaaagc
gccaccatcaacgcgggcggttcagtgaccttcgatgtcagcgactgcgacggtccgtcc
aataccggtatgaccgacgacggcgtgccgcctgcgcatggcagctacgtcctcagcggt
cagtctggtcctggcacccaaacggtgacatataccaacaacggtgatggtgcgacctcg
gactcgttctatctgttggacgaggacaacaaccaggttgtcttcaacatcaccatcaac
cctgcgatcagcgccagcatcgcggtctcgccgtccagcgccaacgaagacagcggcaca
tcgttcacctacacggtgaccttgagccagaccagcagctcggccaccacggtcaacctt
acccgcagcggcaccgccaccagcggcaccgactacacgggcgcggtggccagcatcgtg
gtgcccgccaataccgcctcggccagcttcgccatcaccccggttgccgataccaccgtt
gaggccgacgagacggtggtgatcagcgtggccagcggtagcggctatggcatcggcagt
ccatccagcgccaccgccaccatcgtcaacgacgatgcgctgcccgcactgtcgatcgac
gacgtcagcgtcaatgaaggcaacagcggcaccaccacggccaccttcacggtgagcctg
agtgcggccagcggccagaccgtgtcggtcaattacatcaccgccgatggcaccgccacc
gccggcagcgactacgccgcccgctccggcacgctgaccttcgcgccgggagttaccgcg
cagggcgtggcgatcaccgtcaatggcgacaccgcggtcgaacccaacgagaccttcagc
gtcggcctgtccggcgccagcaacgcgagcatcgcccgcgccactggtaccggcaccatc
gtcaacgacgatgtggtggtggtggtcgggccggcatcgctgccggcggcgaccgcgggc
agcgcctatagccagaccctgagcgccagcggcggcaccgcgccgtacaccttcgccatc
acggccggtgcgttgccggccgggttgagcctgagcgctggcggcgtgctgtccggcacg
cccaccgccagcggcggcttcaacttcaccgcgaccgccaccgacagcggcggcagcccc
accagcggcgcccgtgcttacacgctgaccgtggccgtggccacgaccaccttcccggcg
accagcctgccggccggcaccgccggccaggcctattcgagtgcgctcaatccggcgacc
ggcggcgttgcgccgtacacctacgccgtcaccgccggtgccttgccggcgggcatcacg
ctcgacggcagcagcggcgccctgaccggcacccccagcagcgtgggcagcttcagcttc
agcgtaaccgccacggacagcaccacaggcacgccgtcgcaggccacacgtagctacacc
ttgaccatcgctgcgccgccgatcgtggtcgcgccgtccgcgctgccggccgccacccgc
ggcaccgcctacagccagacgttgagcgccagcggcggcaccgcgccgtatacctacgcg
ctcgccagtggcacgttgccggcaggcatcaccctggccagcaacggcacgctgtcgggt
accgctacggtggaaggcagcttcaacttcaccgtgaccgcgaccgatgcgggcagcttc
accggcaaccaggcctacaccctgaccgtggctggcccgaatctggtcctgccggcgagc
accttgccggcaggcacggccgggcaggcgtactccgcggcgatcacgccggccaccggc
ggcacggcgccttaccgctatgcattgaccggcggtgtcctgccggcgggtgtggtggtg
gatgcggccaccggcgcgctcagcggcacgccgaccgtggcaggcacgttcaacttcacc
ctgaccgtgtccgacagcacgcccagcccggcggcgcaggccagccgcagctacacgctg
accatcgcggcacctgtggtcgtgatcgcgcccactacgctgccggccgccacccgcggt
accgcctacagccagacgttgagcgccagcggcggcaccgcgccgtacacctatgcagtc
agcgcgggcagcctgccggccggaatcacgctggccagcaacggcacgttgtcgggtacc
gccacggtggaaggcagcttcaacgtcaccgtgaccgcgaccgacgcgaacaccttcacc
gccacgcaggcctatgcactgaccgtggccggcccgaacctggcgttgccggcgagcacc
ttgccggcaggcacggccgggcaggcgtactccgcggcgatcacgccggccaccggcggc
actgcgccttaccgctatgcactgactgcgggcgcattgcccaatggcgtgattgtcgat
gcagcgaccggcgcgctcagtggtacgccgaccttgtccggcaccttcaacttcaccctg
accgccaccgacagcaccccgagcccggctgtgcaggccagccagaactactcggtcacc
atcgcggcggcaacgctggtgctggcgcaaccgaccctgccaccggcggtgcgcggcagc
gcgtacaaccaggtgctcacggccagcggcggcgttgcgccctatcgctacagcatcgcc
agcggcacgttgccggccggcctgacgctggccagcgacggcacgctgtcgggcacgccg
acgacgcagggcacctcgtccttcaccatcgcggtggccgatgccggcaatgccagcgcc
acccaggcctacagcttcacggtgagcgatgcggcgccggtggcggtggcggatgtggcg
gccaccatgtccgatgctgcggtgacggtggcggtgaccgccaacgacaccggcaacatc
accgcggtcgccattgccgctgcgccgactaacggcaccgccgtggtcaacgggctggag
ctggtctacacgccggctgccggtttcgtcggcaccgatgtggtgagctacacggtcacc
ggcagcggcggcacctcggcggcggccaccgtgaccatcgcggtcaatgcgcggccggtt
gcggtgtcggtgactgcggcggcagtgccgggcgaggcgcagcaggtcgacctgacccgc
aatgccaccggcgggccgttcgtggcggcggccgtggtcgcggtgctgcctgcgtcggcc
ggtaccgccaccatcacccaggttggtggtctcgccaccgcggcggcggcacgtgcatcg
ggcccgtcgccggcggcggctgcaatggccgagacgcccaccttcatgctgaccttcacc
ccgaacccggccttcgtcggccaggccacggtgcagttcaccttgtccaacgcgttcgcc
acctcggtgccggccaacgtggtgttcaccatcgcgccgcgccgcgacccaagcgtggat
gcggaagtacgcggcctgatcgatgcgcagtccgagtccacgcggcgttttgcgcgggcg
cagatcgacaacttccagcgccgtctggaagccacccatcgcggcggcagcaccttcagc
aacgcggtgagcttccagccgacctcgcattgccgccaggccgaccgcggcatcagtgcg
cagccgtgcagcccggacacgcaggaggccgacaacgacttccgcgatgcgccggctgtg
gccagcagcggcaccagcaccgcgcaggggcagggcgatctggggctgtgggtgggcggt
gcgatccgctcgggcagcctggacaagcagtccaacagcaacggcgtggacttccagacc
gacggcctgagcgtgggcgccgattaccgggtggcgcagtcgctggcgatcggtgcgggc
ctgggttggggccgcgacgacagcgatgtgggcaggaacggcagccactccaaggcgacc
gcctacaccatggcgttgtatgccagcttccatccgggcaaggcgttcttcttcgacacc
ctggtcggctaccagctgctgtcctacgacctgcgtcgctatgtcaccgacgacgcctcg
atggccgaaggcaaccgcgatggcaagcagtggatcgcgtcgctgtccaccggtgcggac
ctgcaacgcggcgagctgcagatcaccccgtatgcgcgtgtggatgtggcgcgcgccacg
ctggatggctatgtcgaagatggcgtggcgccgttcgcgctgcgctatgacgacatggac
gtggccaccaccaccggcaacctgggcctgcgcctggaatggcgccgcgaagtggcctgg
ggccgtctgaccccgcagttgcgcgtggaatatcagcgcgacttccagggccgcggcgat
gccacgctgagctacgccgatctgaacggcgggccgttctaccgcgcaggccagagcgcg
ttcgatcgcaaccgcctgatggtgggcatcggcgcggcgttgctgaccgagcagggcctg
tcgacgcggctggaataccgcggcatcacctacggcgacagcaacaacgatcagacctgg
atgatcaacctggaaaagaaatactga
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