Xanthobacter autotrophicus: Xaut_0002
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Entry
Xaut_0002 CDS
T00581
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
xau
Xanthobacter autotrophicus
Pathway
xau03030
DNA replication
xau03430
Mismatch repair
xau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Xaut_0002
03430 Mismatch repair
Xaut_0002
03440 Homologous recombination
Xaut_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xau03032
]
Xaut_0002
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_0002
Enzymes [BR:
xau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Xaut_0002
DNA replication proteins [BR:
xau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Xaut_0002
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Xaut_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABS65261
UniProt:
A7IB68
LinkDB
All DBs
Position
2273..3394
Genome browser
AA seq
373 aa
AA seq
DB search
MKVTVERAELLKSLSHVHRVVERRNTIPILANVLIKAGKNGLELKATDLDLEVVESVPAE
TGQAGATTVPAHVLYDIVRKLPEGAQVQLEAGGERGTLTVKASRARFSLQTLPEADFPDL
AAGEFSHTFKVKGADFRRLVDKTQFAISTEETRYYLNGIYLHVTEGAGGKSMLRAVATDG
HRLAQAELEAPAGAAGLPGVIVPRKTVAEIQKLLEDKEAEATVSLSTTKIRVQVGSIVLT
SKLIDGTFPDYGRVIPQGNDKTLIVDKDEFAAAVDRVSTVSSERGRAVKLSLAEGKMTLS
VTNPDSGSATEELEVDYTAEPLDIGFNSRYLLDITSQLEGDTAELKLADPGSPTLVRDST
KTDALYVLMPMRV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaccgtcgagcgcgccgagcttctcaaatcgctcagccacgtccaccgcgtc
gtcgagcggcgcaacaccattccgattctcgccaacgtgctgatcaaggcgggcaagaac
gggctggaactgaaagccaccgacctcgacctggaggtggtggagagcgttccggccgag
accggccaggccggggccaccaccgtgcccgcccatgtgctctacgacatcgtgcgcaaa
ctgcccgagggtgcgcaggtgcaactggaggcgggcggcgagcggggcaccctcaccgtc
aaggcgtcccgcgcccggttctcgctgcagaccctgcccgaggccgacttcccggacctc
gcggcgggcgaattctcccataccttcaaggtgaagggcgcggacttccggcgcctggtg
gacaagacccagttcgccatctccaccgaggagacgcgctattacctgaacggcatctat
ctccacgtcaccgagggcgccggcggcaagtccatgctgcgggcggtggccaccgacggc
caccgcctcgcccaggccgagctggaggcgccggcgggcgcggccggcctgcccggcgtc
atcgtgccgcgcaagaccgtggccgagatccaaaagctgctggaggacaaggaggcggag
gctaccgtctcgctctccaccaccaagatccgggtgcaggtgggctccatcgtgctcacc
tccaagctcatcgacggcaccttccctgattatggaagggttattccccagggcaacgac
aagaccctgatcgtggacaaggacgagttcgccgccgcggtggaccgcgtctccacagtg
tccagcgagcgcgggcgggcggtgaagctgtcgctggccgagggcaagatgacactctcc
gtcaccaatcccgattcgggcagcgccaccgaggaactggaggtggactacaccgccgag
cccctcgatatcggcttcaactcccgctacctgctggacatcacctcgcagctggaaggc
gacacggctgaactgaagctggccgaccccggctcgcccaccctggtgcgcgattccacc
aagacggatgcgctctacgtcctcatgcccatgcgggtgtga
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