Xenorhabdus bovienii SS-2004: XBJ1_0912
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Entry
XBJ1_0912 CDS
T01186
Symbol
dacC
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo00550
Peptidoglycan biosynthesis
xbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XBJ1_0912 (dacC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xbo01002
]
XBJ1_0912 (dacC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
XBJ1_0912 (dacC)
Enzymes [BR:
xbo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XBJ1_0912 (dacC)
Peptidases and inhibitors [BR:
xbo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
XBJ1_0912 (dacC)
Peptidoglycan biosynthesis and degradation proteins [BR:
xbo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
XBJ1_0912 (dacC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
CBJ80053
UniProt:
D3UZM4
LinkDB
All DBs
Position
complement(921538..922743)
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AA seq
401 aa
AA seq
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MKKRRQVQIIKSFTVGLGIFWLMGVNTYAMDEPAAPEIDAKSYILMDYASGKILASHNPD
ERLDPASLTKVMTSYVVGQSIKSGKISTEDQVTVGKDAWATGNPALKGSSLMFLKPGDRV
KVIDLNRGIVIQSGNDASIALADYVAGSQDAFVDLMNKYSKTLGLENTHFKTVHGLDAAG
QYSTARDMALLSQAMIRDVPEEYALNKEKEFTFNNIRQPNRNRLLWNQNMNVDGVKTGHT
SGAGYNLVASAAEGSMRLISVVLGAPSDRMRFSDSEKILSWGFRFYEASTPLKASDTLVT
ERVWFGTRSEVALGVEKDTAVTVPRGQANNLKASFTLTQTSLEAPLAKNQVVGTVNFSLN
DKVIDQRPLVVKEAVEESGFFGRIWDLIVKTVSGWFNSIFG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagacggcaagtacagataatcaaatcttttactgttggcttgggtattttt
tggttgatgggtgtcaacacatacgcaatggatgaacccgcagcacctgaaattgatgcg
aaatcctatatattgatggattacgccagtggaaaaattctggcatcccataatcccgat
gaacggctagatccagcgagtctgacaaaggtgatgaccagctatgttgttggtcagtcg
attaagtcgggaaagatttctacagaagatcaggtaaccgtaggtaaagatgcttgggca
accggcaatccggcgcttaaagggtcatccctgatgtttttgaaaccgggtgatcgggtc
aaagtcattgatttgaaccgtggcattgtgatccaatctggcaacgatgccagtattgcc
cttgcggattatgtagcgggcagtcaggatgctttcgttgatttgatgaataaatactct
aaaactctggggctggaaaatacccatttcaagactgttcacggtctggatgctgcggga
caatacagcactgctcgtgatatggcgctcttaagtcaggctatgatccgtgatgtgcca
gaagaatatgctctaaataaagagaaagaattcactttcaataatatccgtcaacctaac
cgcaatcgcctgttgtggaatcagaatatgaatgtggatggtgtaaaaaccggacatacc
agcggggcaggatataaccttgttgcttctgcagcggaagggtcaatgcgtttgatttca
gttgtactgggagcgcctagtgatcgaatgcgtttctctgacagtgaaaagatcctgtca
tggggattccgtttttatgaagccagtactccgcttaaagccagtgacacactggtgaca
gaaagagtatggttcggtacgcgttcagaggtggctttaggtgtagaaaaagatacggcc
gtgacggtgccgcgaggtcaagcgaataacctgaaagccagttttacgctgacccaaact
tcacttgaagcgccattggcgaagaatcaagttgtgggcactgtgaatttttcgttgaat
gataaggttattgatcaacgtcctttggttgttaaagaagccgtagaagagagtggattt
tttgggcgtatttgggatttaattgtgaagactgtcagcggctggtttaactcaattttc
ggatag
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