Xenorhabdus bovienii SS-2004: XBJ1_1689
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Entry
XBJ1_1689 CDS
T01186
Symbol
sbcD
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
xbo
Xenorhabdus bovienii SS-2004
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbo03400
]
XBJ1_1689 (sbcD)
DNA repair and recombination proteins [BR:
xbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XBJ1_1689 (sbcD)
Archaeal homologous recombinant proteins
XBJ1_1689 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
VPS51_Exo84_N
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
CBJ80815
UniProt:
D3V0Y3
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All DBs
Position
1648693..1649907
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AA seq
404 aa
AA seq
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MRIIHTSDWHLGQYFFTKNRAAEHQHFLQWLIEQIIRHQVDALVIAGDIFDTGSPPSYAR
ELYNQFVVELRPTGCQLVILGGNHDSVATLNESKALFSCLNTTVIASADADIQQQIKVLN
NKNGEAGAILCAIPYLRPRDIMTSQAGQSATQKQQALQNAITEHYHQLYQQADALREKLG
QPLPIIATGHLTTVGASTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQIIAKSEH
IRYSGSPIPLSFDEVGQEKSVCLVDFKEDKFDNVTLLPIPNYQPMQLIRGNLQQIEAQLQ
TFKAYQGERPVWLDIEVATQDYLPDIQKRIQTMTTDLPVEIILLRRRKAARQISLSETNK
ETLNELSVHEVFERRLALAEIEDQPQKQRLTTLFKQTLDDISQQ
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcattcatacgtcggactggcatctcgggcaatatttctttaccaaaaatcgt
gccgcagaacatcagcactttttgcagtggcttattgaacaaatcatacggcatcaggtt
gatgcattggtgattgccggcgatatttttgatactggctctcctcccagctatgcccgt
gagctttataaccagttcgttgtggagctacggcccactggctgccagcttgtcattctt
ggtggaaaccatgattccgtcgccacgctcaatgaatcaaaagcgctattctcttgtctg
aatacaacagtaatagccagtgcagacgccgacatccagcagcagataaaagtattgaat
aacaaaaatggagaagcgggagccattctctgtgccattccttacctgcgtccacgggat
atcatgaccagccaggccggtcagtcagccacgcaaaaacagcaggcattgcagaatgcc
attactgaacactatcaccagctttatcagcaagctgatgcattacgggaaaaactcggc
cagccattgccgattattgcaaccggacacctgaccacggtgggtgcttccacctcagat
tctgttcgagatatttacattggtacgttggacgcattccccgcacaagcattcccacct
gctgattatattgcattagggcatatccaccgcccacagatcatcgctaaatcagagcat
atccgttacagcggctccccgatccccctgagttttgatgaagtcgggcaagaaaaaagc
gtctgtctggttgattttaaagaagacaaatttgataacgtcactcttttgcccatccca
aactatcaaccgatgcagttgatccgtggaaatctgcaacagattgaggctcagttgcag
acattcaaagcatatcagggagaacgtcctgtctggctggatattgaagtcgcgactcaa
gattacctgcctgatatccaaaaacgcatccaaactatgactacggatctacccgttgaa
atcattctgttacggcgcagaaaggcggcacgccaaatttccctgtctgaaacaaataaa
gagacgctcaatgaactcagcgtgcatgaagtcttcgaacgacggctagcactggctgag
attgaagatcagccccagaagcaacgcctgacgaccctgtttaagcaaacgctggatgat
atttctcagcaataa
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