Xenorhabdus budapestensis: HGO23_06230
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Entry
HGO23_06230 CDS
T07176
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
xbu
Xenorhabdus budapestensis
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xbu03400
]
HGO23_06230
DNA repair and recombination proteins [BR:
xbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
HGO23_06230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_22
DZR
AAA_30
P-loop_SecA
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QTL40935
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Position
complement(1335787..1337406)
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AA seq
539 aa
AA seq
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MLNITLNFAQERGLSLLRQSWKQHRTFMVYSPTGSGKTGLAAFITDGYVSRNMRVMFCVP
YTILVDQTAAKFTEYGLPAHEISYVWRDHPNYDPTRLIQIASADTIIRREFPDNIDLLII
DEAHLRRKRMLEIIRDSDIPVIGLSGTPFAPFLGAYYEKLIKPTTMKELIQRGDLSKYEF
YAPTKPDLSGVKSNQSAEYGSDYKEDEIAEIMCGADLVGDIVSNWLANGNNQPTICFCVT
VSHANFVTVEFNRAGINAEIITAQTPPEERQIIIHRFEQGATKVIVNVGTLIAGFDSDVR
CIIYARPTKSEIRWTQCLGRGLRTAPGKEACLIFDHSGSVHRLGYPDDIEYDELPSKNDG
MKTRDSDREQEKREKLPKECPSCHYMKPAGVYICPKCGFKPLAGEDIEVDTSRTIKKLSK
KERIYTQAEKQSFYSQLKYYQNQRASQGKILSDGWVGNTFKDKFGVYPRGLHDTPQELTP
EVNNFIKHKQIAWAKSRKKTEQVQPSSNEQQEMRLEVARGKVREIRKQLDTPLYQGEAL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattaccctcaactttgcccaagagcgcggcttgagtctgttgcgtcagagc
tggaagcaacaccgtactttcatggtgtacagcccaacgggatcaggtaaaaccggactg
gcggcgttcatcactgacggctacgtttcccgcaatatgcgtgtcatgttctgtgtacct
tatacaatcctcgtagaccagacggcggcaaagtttacagagtatggcctgccagcgcac
gaaatcagttacgtctggcgtgaccatccaaactatgacccgacccggctaatccagatt
gcgtcggccgataccattatccgccgtgaattcccggacaatattgatttgctgattatt
gacgaggcgcacttacgccgtaagcggatgctggaaattatccgtgacagtgacattccg
gtgattgggttatccggtacaccctttgcgccgttccttggggcttactacgaaaaactg
attaagcccaccacgatgaaagaactgattcaacgcggggatctgagcaagtatgaattc
tatgcgccaaccaagcccgacttaagcggtgtgaaaagcaatcaaagtgctgaatacggc
agtgactacaaggaagatgagatagccgaaatcatgtgcggcgcagatttggtgggcgat
attgtcagcaattggttagcgaatggtaataaccagccgactatctgtttttgtgtcact
gtcagtcacgccaacttcgtcactgtcgaattcaaccgggcggggatcaacgccgagatc
attacagctcagacaccccccgaagaacgccagattattattcaccgcttcgaacagggc
gcaaccaaagtcattgtgaatgttggcaccttgatcgcgggttttgatagcgatgtgcgg
tgcatcatctacgcccggccgacaaaatcagaaattcgctggactcagtgtcttggcaga
ggcttgcgtactgcaccgggtaaagaagcctgccttatcttcgatcactccggttctgtc
catcgcctcggctacccggatgatatcgaatatgacgagttgcccagtaaaaacgacggc
atgaaaacccgtgacagtgaccgggaacaggagaagcgggagaagctaccgaaagagtgc
ccgtcttgccattacatgaagccagcgggtgtttacatctgcccgaagtgtggatttaag
ccactggcgggtgaggatattgaagtagacaccagccgcaccatcaaaaagctcagtaag
aaagagcgcatctacacccaggctgaaaagcagagtttctactcgcagttgaagtactac
cagaaccagcgggcgtcacaagggaagatcctcagtgatggctgggtaggaaatacgttt
aaagacaagttcggtgtctatccgcgtgggctgcatgacaccccgcaggaactgacaccc
gaagtgaacaatttcatcaagcacaaacaaattgcctgggcgaaatcccgtaagaaaacc
gaacaggtgcagccgtccagcaacgaacaacaggaaatgcgccttgaagttgcccggggc
aaggtgcgtgaaattcgtaagcagttagatacaccgttatatcagggagaagcactgtga
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