Xenorhabdus budapestensis: HGO23_16035
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Entry
HGO23_16035 CDS
T07176
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu01501
beta-Lactam resistance
xbu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HGO23_16035
01503 Cationic antimicrobial peptide (CAMP) resistance
HGO23_16035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xbu02000
]
HGO23_16035
01504 Antimicrobial resistance genes [BR:
xbu01504
]
HGO23_16035
Transporters [BR:
xbu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HGO23_16035
Antimicrobial resistance genes [BR:
xbu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HGO23_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Phage_tail_X
Patched
Motif
Other DBs
NCBI-ProteinID:
QTL39308
LinkDB
All DBs
Position
3640204..3643338
Genome browser
AA seq
1044 aa
AA seq
DB search
MPKFFIERPIFAWVIAIITMLSGLLAIMKLPVEQYPSIAPPSISISASYSGADATTVQNT
VTQVIEQNMNGIDNLVYMSSSSDSAGRVSITLTFEANTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVDKTTSSFLMVAGFISEDDSMTQDDISDYVGASVKDSLSRVTGVGEAMLLGT
QYAMRIWLDPDKLVNYKMTVQDVMKAIKDQNNQVAAGQLGGTPPVPGQRLNVSIIAQTRL
SSPEQFSKILIRVNPDGSKISLSDVATVELGAQNYGFIARFNGKASSGLGIKLATGANAL
DTSKAVKKVLAELQPFFPHGLTVVYPYDTTPFVKISIFEVVKTLAEAILLVFVVMYLFLQ
NFRATLIPTIAVPIVLLGTFSVLAAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
QEEGLSPKEATKKSMGQIQSALVGIALVLSAVFVPMAFFGGSTGAIYRQFSVTIVSAMIL
SVFVALILTPALCATMLKPVTKGSHGIQTGFFGWFNRLFEKSTHHYTDSVGRMLRGTGRY
LLIYVVLIAGMALIFMRIPSSFLPQEDQGVLLAMVQLPSGSTQEQTQKVLDEVNDYFYTD
EKDVVQSVFTLNGFGFAGMGQNMGLAFVSLKDWDERKAAKDKVQAILDRANIRFSQIKEG
MVFAFNIPAIVELGSSSGFDFQLIDRGNLGHEALTNARNQLLGMVAQHPDMLTNVRPNGQ
NDTPQYRFYIDQEKAEALGVSVNDINTTLSTMFGGAYINDFIDRGRVKKVYIQANSAFRM
LPKDIGKLYVRNYYGEMVPFSAFIDTSKEPWIYGPPRLERYNGLPSMEIVGEAARGKSTG
DSMALMEKLASQLPPGVGYDWTGMSYQERLSGNQAPALYALSLIVVFLCLAALYESWSIP
FSVMLVVPLGVIGALLATLIRGLDNDIYFKVGLLTTIGLSAKNAILIVEFAKDLLEKEGK
GLIEATLEAARMRLRPILMTSLAFMLGVMPLVLSNGAGSGAQNAVGTGVLGGMIAATSLA
IYFVPVFFVVIRRRFSKKNEDYTL
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagttttttatagaacgaccaatctttgcatgggtaattgcgattatcactatg
ctttctggtctgttggcaataatgaaattacctgtggagcaatatccttctattgcaccg
ccatcgatttctatctcagcaagttattctggcgctgacgcaacaacagtacagaatacg
gtcactcaagttattgagcaaaatatgaatgggatcgataacttagtgtacatgtcttct
agtagtgactctgccggtcgcgtgagtatcacactcacctttgaagcgaacacagaccct
gatattgcacaagtgcaggtacaaaataaactgcaactggcaatgcctttgttacctcag
gaagttcaacagcaaggcgttagcgttgataaaacaaccagttcatttttaatggtcgcg
ggcttcatttctgaagatgattctatgactcaggatgatatctccgactatgttggagcc
agtgtcaaagactcactcagccgcgttactggtgtgggtgaagcaatgctgcttggtact
cagtatgccatgcgtatctggctcgatcctgacaagttagtcaattataaaatgactgta
caagatgtcatgaaggccatcaaggatcagaacaaccaagttgcagccggtcagctaggg
ggaacacctcctgttcccgggcaacgcctaaatgtttccatcattgcccagacacgtcta
agttctcccgaacaattcagcaagatcctgatacgtgtaaatcctgatggttcaaaaatc
agtctgagtgatgtagctactgttgagcttggtgctcaaaactatggcttcatcgcccga
ttcaacggtaaagcttcgtcagggctcggtatcaaattagcaaccggtgccaacgccttg
gatacgtctaaagctgtcaagaaagtactggctgaactgcaaccatttttcccgcatggt
ttgaccgttgtatatccgtatgacacaactcccttcgttaagatttctattttcgaagtg
gtgaaaacactggcagaagctatcctgctggtcttcgttgtcatgtatctgttcctgcaa
aatttccgggcaacattgatcccaaccattgcggttccgatcgtattgctgggtacattt
tcagtactggccgcatttggttactccatcaatacgttaaccatgtttgccatggtactt
gccatcgggctacttgtagacgatgccatcgtcgtggtagaaaacgttgagcgcgtcatg
caagaagaagggctttcaccaaaagaagccacaaaaaaatcaatgggacagatccaaagt
gctttggtcggtatcgcactggtactttctgcggtatttgttccaatggcgttttttggt
ggatcgaccggtgcaatttaccgtcaattctcggtgacaatcgtctcagcaatgatattg
tctgtatttgtcgccttgatcctgacaccagcactctgtgcaaccatgcttaagcccgtt
accaaaggcagccatggcattcaaaccggtttctttggctggtttaaccgtttgttcgaa
aaaagtacgcaccactataccgatagtgtggggcgtatgttacgtggcacaggacgttat
ctgctgatttatgttgtactgatcgcaggtatggctctgatattcatgcgtataccctct
tctttccttccacaagaagatcagggtgtattgctggcaatggttcagttaccttccgga
tcaactcaggagcagacacaaaaagtattggatgaagttaatgattacttctataccgat
gaaaaagacgttgttcaatctgtatttaccttaaacggctttggttttgccggtatggga
caaaatatggggctggcctttgttagcttaaaagattgggatgaacgtaaggctgcaaaa
gacaaagtccaggcaatcctagacagagctaacatccgtttttcacaaatcaaggaaggg
atggtattcgcatttaacattccggcgattgtggaattaggctcctccagcggttttgat
ttccagctaattgatagaggaaaccttggacatgaagctctgacaaatgcacgtaaccaa
ttactaggcatggtcgctcaacatcccgatatgctcacgaatgttcgtccaaatgggcaa
aatgatactcctcagtaccgtttctatattgatcaggagaaagcagaagcactgggtgtt
tccgtcaatgacatcaacacaacattaagtacgatgtttggtggtgcttatatcaatgat
ttcatcgaccgaggccgggtcaaaaaggtttatattcaggccaattcagctttccgtatg
ttgccaaaagatattggcaagctgtatgtccgtaactactacggtgaaatggtgccattc
tctgcgttcatagatacttccaaagaaccgtggatttatggtcctccgcgtctggaacgc
tataacggattaccatcaatggaaatcgtcggtgaagctgcccgcggaaaaagtaccggt
gattcaatggccctgatggaaaaacttgcttcacagttgccaccgggtgttggctatgac
tggacgggaatgtcttatcaggaacgcttatcaggtaaccaagcaccggcactatacgct
ctatcattgattgtcgtgttcctctgtctggcagcactgtatgaaagttggtccatacca
ttctctgtaatgttagttgtaccactaggggttattggtgcattactggcaactttaatt
cgtggcctggacaacgatatctactttaaagtaggtttgctaacaacaatcggtctgtct
gcaaagaatgccatccttatcgttgaattcgccaaagatttgctagagaaggaaggtaaa
ggactaatagaagcaaccttggaagccgcgagaatgcgtttacgtccgattctgatgact
tctttagcctttatgctaggtgtcatgcctttggtcttgagcaatggtgctggctctgga
gctcaaaatgccgtaggaactggcgtactgggaggtatgattgctgcaacatcgttggca
atctatttcgtccctgtattctttgttgtaattagacgccgttttagcaaaaaaaatgag
gattataccctatag
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