Xenorhabdus bovienii CS03: XBW1_4338
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Entry
XBW1_4338 CDS
T03845
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
xbv
Xenorhabdus bovienii CS03
Pathway
xbv03030
DNA replication
xbv03430
Mismatch repair
xbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XBW1_4338 (holC)
03430 Mismatch repair
XBW1_4338 (holC)
03440 Homologous recombination
XBW1_4338 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xbv03032
]
XBW1_4338 (holC)
03400 DNA repair and recombination proteins [BR:
xbv03400
]
XBW1_4338 (holC)
Enzymes [BR:
xbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XBW1_4338 (holC)
DNA replication proteins [BR:
xbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XBW1_4338 (holC)
DNA repair and recombination proteins [BR:
xbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XBW1_4338 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
CDM91687
UniProt:
A0A0B6XCX3
LinkDB
All DBs
Position
4217676..4218140
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AA seq
154 aa
AA seq
DB search
MKNATFYLLEKLSQEQSSSSDELQPHEWLACQLAADQWRAGKRVLIACESQQQAEKLDEA
LWQREPSQFVPHNLAGEGPRYGAPVELCWPQKRSNVPRDILVTLLPHFADFATAFHEVID
FVPIDENLKQLARERYKVYRSVSFNLTMATPPIY
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgccaccttctatttattggaaaagctctcacaggaacaatcatcgtcttct
gatgaattacagccacatgaatggctggcatgccagcttgccgctgatcaatggcgggca
gggaagcgggttctgattgcttgcgaaagccagcagcaggccgaaaaactggacgaagca
ttatggcagcgggagccgagtcaatttgtaccgcacaaccttgccggagaaggccctcgt
tatggtgcccctgtggagttgtgctggccgcagaaaagaagcaatgttccccgcgatatt
ctggtaacactgcttcctcactttgcagactttgccacagctttccatgaagtgatagac
ttcgtccctattgatgaaaatctgaaacagttagcgcgcgaacgatataaagtttatcgt
agcgtcagctttaatttgaccatggcaacgccgccaatctattga
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