Xanthomonas campestris pv. campestris B100: xcc-b100_3315
Help
Entry
xcc-b100_3315 CDS
T00759
Symbol
prpR
Name
(GenBank) propionate catabolism regulatory protein
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xca
Xanthomonas campestris pv. campestris B100
Brite
KEGG Orthology (KO) [BR:
xca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xca03000
]
xcc-b100_3315 (prpR)
Transcription factors [BR:
xca03000
]
Prokaryotic type
Helix-turn-helix
Other families
xcc-b100_3315 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_23
HTH_17
AAA_7
AAA
AAA_2
HTH_Tnp_ISL3
HTH_29
HTH_28
HTH_Tnp_1_2
nSTAND3
ATPase
Xre-like-HTH
HTH_50
Motif
Other DBs
NCBI-ProteinID:
CAP52680
UniProt:
B0RYG0
LinkDB
All DBs
Position
3796188..3797837
Genome browser
AA seq
549 aa
AA seq
DB search
MKQSEHYATSLKRQRIMPHSSFVAPADGTLPVIWTVSVSRLTGLLADVIPEFDQRAHIEQ
INLGFAEAVEVIGQRLRRERCDVLVAGGSNAAYLRSRLPLPLAPIQATGFDLMEALARAR
RIAPRIGVVTHATDVPSFQPFQDSFALDIAHRRFVTAEDARDCIADLRASGIQVIVGTGM
AIDFAEQAGLPGVLLYSADSVRLALDQAIALATAPSSAAPALRNATRRTRNQPAALLGED
TAMVQVRALVQLYAPHASTVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAITESLL
EAELFGYSDGAFTGARRGGHTGLIEAAQDGTLFLDEIGELPLPLQTRLLRVLEEREVLRV
GATVPVPVDVRVVAASLQPLQTLVDQGRFRRDLFYRLAALRIDLPPLRNRPDDIALLLTH
YAQHGSETALPLSPAALQRLQQHAWPGNVRELRNLVERLCIHWKAQAQGQVSLAQLEAWA
PELADASTPAGYDSTSADAASSRAHLTATLVRAALERAQGNRASAAKALGVSRTTLWRWM
QAQELASSQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtcggagcactatgcaacatcactgaaacgtcagcgaatcatgcctcactcc
tccttcgtcgctcctgcggatggcaccctgccggtgatctggacggtcagcgtgtcgcgc
ctgaccggcctgctggccgatgtcattcccgagttcgaccagcgcgcacacattgagcag
atcaacctcggctttgccgaggcggtcgaggtcatcggccagcgcctgcgccgcgagcgc
tgcgatgtgctggtggctggcggctccaacgccgcttacctgcgcagccggctaccgctg
ccgctggcgccgatccaggccaccggcttcgacctgatggaagcactggcgcgcgcgcgc
cgcatcgcaccgcgcatcggcgtggtgacccatgccaccgacgtgccgtcatttcagccg
ttccaggacagcttcgcgctggacatcgcccaccgccgcttcgtcactgccgaggacgcc
cgcgactgcatcgccgacctgcgtgccagcggcatccaggtgatcgtcgggaccggcatg
gcgatcgacttcgccgaacaggccggcctgcccggcgtgttgttgtactcggccgactcg
gtccgcctggcgctcgaccaggcgatcgccctggccaccgcgcccagcagcgcagccccc
gctctacgcaatgccacacgccgcacgcgcaaccaaccggccgcactgctcggcgaagac
accgccatggtgcaggtgcgcgcactggtgcagctgtacgcgccgcacgccagcaccgtg
ttgatcagcggagagaccggcaccggcaaggagctggttgcgcggcagctgcacgccggc
agccgccgccggggccggtttgtggcgatcaactgcggcgcgatcaccgagtcgctgctg
gaagcggaactgttcggctacagcgatggcgccttcaccggcgcgcggcgcggcggccac
acagggctgatcgaagccgcgcaggacggcaccctgtttctcgatgaaatcggcgagctc
ccactgccgctgcagacccgcctgctgcgtgtactggaagaacgcgaggtgctgcgcgtt
ggcgccaccgtgccggtaccggtcgatgtgcgcgtggtggcggccagcctgcagccgctg
cagacactcgtcgaccaggggcgcttccgccgcgacctgttctatcgcctggccgcgttg
cgcatcgacctgccgccgctgcggaatcgccccgacgacatcgccttgttactcacgcac
tacgcgcaacacggcagcgagacggcattgccactctcgcccgctgcgctgcagcgactg
caacagcacgcctggcccggcaacgtgcgtgagctacgtaacctggtcgagcgtctgtgc
attcattggaaggcgcaagcacagggccaggtgagtctggcccagctcgaggcctgggct
ccggagctggccgatgccagcacgccagcgggctacgattccacatccgccgacgcagcc
agctcgcgcgcgcacctcaccgcgacattggtacgtgcggcactggaacgtgcgcagggc
aaccgcgcgtccgcagccaaagcgttgggcgtctcgcgcaccaccctctggcgctggatg
caggcacaggagctcgcttcttcgcagtga
DBGET
integrated database retrieval system
