Xanthomonas campestris pv. campestris B100: xcc-b100_4421
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Entry
xcc-b100_4421 CDS
T00759
Name
(GenBank) exported conserved hypothetical protein
Organism
xca
Xanthomonas campestris pv. campestris B100
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
Cadherin_5
NtrZ
FctA
Motif
Other DBs
NCBI-ProteinID:
CAP53794
UniProt:
B0RMI1
LinkDB
All DBs
Position
complement(5019180..5024399)
Genome browser
AA seq
1739 aa
AA seq
DB search
MNKQRRFLADATGGRARLVVMFVLFAMTLLAPGWAMAQASTYCPTLNATVVQGGSVQIDV
TTCDGTGVDDIGVGWNGVQPAHGTIVVPNPSGAQGTQIVTYTHNGDNATSDTFPLEDGRS
DIITVNITITPSQPTLSINDVSVNEGNAGTSNATFTVSLSQPAGAGGASFDIATADGSAI
AGVDYVASSLTGQTIPAGSSSATFTVLVNGDTLSEPNETFFVNVSNVSGAGVSDAQGQGT
IVNDDALPSLSIDDVSVNEGNSGTTTATFTVTLSAASGQTVSVNYASADGTATAGSDYVA
RSGTLTFAPGTTAQGVAITVNGDTALEPNETFSVGLSGASNASIARATGAGTILNDDVVV
TVGPASLPAATAGSAYSQNLSASGGTAPYSFAVTAGALPAGLTLSAAGVLSGTPTATGSF
NFTATATDSGGSPTSGNRAYTLTVAGATVTLPATSLPAGTAGQAYSGALNPATGGIPPYT
YAVTAGALPAGITLNGSSGALTGTPGSVGSFAFSVTATDSTSGTPSQGTRGYTLNIAAPP
IVVAPSTLPAATRGTAYSQTLSASGGTAPYTYALASGALPAGLTLASNGTLSGTATVEGS
FNFTVTATDAGSFTANQAYSLTVAGPNLVLPASSLPAGTAGQAYSASITPATGGTAPYSY
ALTAGALPTGVVVDVATGGLSGTPTVAGTFNFTLTVSDSTPSPAAQASRSYTLTIAAPVI
VVAPTALPAATRGTVYSQTLSASGGTAPYTYAVSAGNVPAGLTLASNGTLSGTATVEGSF
NFTVTATDANTFTASQADAVTVAGPNLALPASSLPAGTAGQAYAATIAPATGGTAPYSYA
LSAGVLPNGVVLDTATGGLSGMPTLSGTFNFTLTVTDSTPSPAAQASQSYTLSIAAPVIV
VAPTALPAATRGTAYSQVLTASGGTAPYTYEVNAGSAPAGLTLASNGTLSGNPTVEGGFN
FTVTATDANNFTASQAYVLTVASPNLALPASNLPAGTAGQAYTAAISPVTGGTAPYSYAL
TAGALPSGVVLDAATGTLSGTPTVSGTFNFTLTVTDSTPSPAAQANQSYTLSIAGATLVP
SQPTLPPAVRGTPYSQVLTATGGVAPYTYSVASGTLPAGLTLASNGVLSGTPTAEGSTSF
TIAVADAGNATATQAYTFTVSTAAPVAVADAAATMSDAAVTVPVTANDTGNITAIAIATA
PTNGTAAVNGLELVYTPAAGFVGTDVVSYTVTGSGGTSAAATVTIAVNARPIAVSVTAEA
VPGAASQVDLTRNATGGPFVAAAVVAVLPASAGTATITQVGGAAAAAARTSGFVPAATAQ
ASSPSFMLTFVANPAFVGQATVQFTLSNAFATSAAASVTFTVAPRRDPSVDAEVRGLIDA
QSESTRRFAKAQIDNFQRRLEATHRGGSTLSNAVTFQPTSHCRQADRGISAQPCSPDTQD
ADNEFRDAPAMASGGNGGAQGQGDLGLWVGGAIRSGSLDRQANTNGVDFQTDGLSVGADY
RLAPSLAVGAGLGWGRDDSDVGRNGSHSKATAYTMALYASFHPGKAFFFDTLVGYQLLSY
DLRRFVTDDASMAEGSRDGKQWIASLSSGADLQRGNLQITPYARVDVARATLDGYVEDGI
APFALRYDDMDVATTTGNLGLRLEWRRDVAWGRLTPQVRVEYQRDFQGRGDATLGYADII
GGPVYRTGQNAFDRNRLMVGIGAALLTEQGLSTRLEYRGITDGDSGNDQTWMINLEKKY
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcagcgtaggtttctagcggacgccaccggcggccgcgcacgtttggtcgtg
atgtttgtcctgttcgcgatgacgctcttggcaccaggctgggcgatggcgcaagcctcg
acctactgcccgaccttgaacgccactgtggtgcagggcggttcggtacagatcgacgta
acgacctgcgatggcacgggggtagacgatatcggcgttggctggaacggtgtgcaacct
gcgcacggcacgatcgtcgttcccaacccaagcggcgcccagggcacgcagatcgtcacc
tacacccataacggtgacaacgccaccagcgatacgttcccgctagaagatggccggagc
gacatcatcactgtcaacatcaccatcaccccgagccagccgacgctgtcgatcaacgac
gtctcggtgaatgaaggcaatgccggcacgagcaatgccaccttcaccgtctcgctcagc
cagccggccggtgccggcggcgccagcttcgatatcgccaccgccgatggctcagccatc
gcaggcgtggactacgtcgcctccagcctcaccgggcagaccatccccgctggtagtagc
agcgcgactttcaccgtgctggtcaacggcgacacgctcagcgaacccaacgagaccttc
ttcgtcaacgtcagcaacgtcagcggcgccggggtcagcgacgcccaaggccagggcacc
atcgtcaacgacgatgcgctgccttcgctgtcgatcgacgacgtcagcgtcaacgaaggc
aacagcggcaccaccacggccaccttcacggtgaccctgagcgcggccagcggccagacc
gtgtcggtcaattacgccagcgccgacggtactgccaccgccggcagcgactatgtcgcg
cgttccggcaccctgacgttcgcgcccggcaccaccgcgcaaggcgtggccatcaccgtc
aacggcgataccgcgctcgaacccaacgagaccttcagcgtcggcctgtccggtgccagc
aacgcaagcatcgcgcgcgccaccggcgccggcaccatcctcaacgacgacgtggtggtg
acggtcgggccggcatcgctgccggcggcgaccgcgggcagcgcctacagccagaacctg
agcgccagcggcggcaccgcgccgtacagcttcgccgtcactgccggtgcgttgccggcc
gggctgaccctgagcgctgccggcgtgctgtccggcacgcccacggccaccggcagcttc
aacttcaccgccaccgctaccgatagcggcggcagtcccaccagcggcaaccgtgcctac
acgttgaccgtggccggcgcgacggtgaccttgccggcgaccagcttgccggccggcact
gcaggccaggcttattcgggggcgctcaacccagcgaccggcggcattccgccgtatacc
tacgccgtcactgccggcgccctgccggcgggcatcacgctcaatggcagcagcggcgcc
ttgaccggcacccccggcagcgtgggcagctttgccttcagcgtgaccgccaccgacagc
accagcggcacgccctcgcagggcacacgcggttacaccttgaacatcgccgcgccgccg
attgtggttgcgccgtccacgctgccggccgccacgcgtggcactgcctacagccagacg
ctgagcgccagtggcggcaccgcgccgtacacctacgcactcgccagtggcgcattgccg
gccggcctcaccctggccagcaacggcacgctgtcgggtaccgcaacggtggaaggcagc
ttcaacttcaccgtgaccgccaccgatgcggggagcttcaccgccaatcaggcctacagc
ctgaccgtggctggcccgaacctggtgttgccggcaagcagcttgccggcaggtaccgcc
gggcaggcgtactccgcgtcgatcacgcccgccacgggcggcaccgcgccttacagctat
gcactgaccgccggtgcgttgccgacgggtgtggtcgtggacgtggcgaccggtggactc
agcggcacgccgaccgtggcgggcacgttcaacttcaccctgaccgtgtccgacagcacg
cccagcccggcggcgcaggccagccgcagctacacgctgaccatcgcagcacctgtcatc
gtggtcgcgcccactgcgctgccggcggccacgcgcggcacggtctacagccagacgctc
agcgccagcggcggaaccgcgccatacacgtatgccgtcagcgcgggcaacgtgccggct
ggcctcaccctggccagcaacggcacgctgtccggcaccgcgacggtggaaggcagcttc
aacttcaccgtgactgcgaccgatgcaaacaccttcaccgcttcgcaggccgatgcagtg
acggtggccggcccgaacctggcgttgccggcgagcagcttgccggcaggtacggcgggg
caggcctacgcggcgacgattgctcctgccaccggcggcaccgcgccctacagctatgca
ctgagcgccggcgtattgcccaacggcgttgtcctcgatacggcgaccggcggcctcagc
ggcatgccgaccctgtctggcacgttcaacttcaccctgactgtcaccgacagcacgccc
agcccggctgcgcaggccagccagagttacacgctgagcattgcggcacctgtcatcgtg
gtcgcgcccactgcgctaccggctgcaacccgcggcacggcctacagccaagtactgacc
gccagcggcggcaccgcgccgtacacctatgaggtgaacgcaggcagtgcaccagctggc
ctcaccttggccagcaacggcacgctgtccggtaacccgacggtggaaggcggcttcaat
ttcaccgtgacggcgaccgacgcgaacaacttcaccgcgtcgcaggcctatgtactgacg
gtggccagcccgaacctggccttgccggccagcaacttgccggccggtacggcggggcag
gcctacacggcggcgatttcgccggtgaccggcggcactgcgccgtacagctatgcactg
accgcgggcgcattgccgagcggtgtggtgctggacgctgcgaccggcacgctcagcggt
acgccaacggtgtctggcacgttcaacttcaccctgactgtcaccgacagcacgcccagc
ccggccgcgcaggccaaccagagctacacgctgagcattgccggcgccacgttggtacct
agtcaacccacgctgccgccagcggtgcgcggtacgccgtacagccaggtgttgaccgcc
accggtggtgttgcgccgtacacctacagcgttgccagcggcaccttgccggccggactg
acgctggcgagcaacggcgtgttgtcaggcacgcccaccgccgaaggcagcacgtccttc
accatcgcggtggccgatgccggcaacgctactgcgacgcaggcgtacaccttcacggtg
agcacggcggccccggttgccgtggccgatgccgcggccaccatgagcgatgcggcggtg
acggtgccagtgaccgccaacgacaccggcaacatcactgcgatcgccattgcgaccgcg
ccgaccaacggcaccgccgcggtcaatgggctggagctggtgtacacgccggcggccggg
tttgtcggcaccgatgtggtgagctacacggtcaccggcagcggtggaacctcggccgca
gcaacggtgaccatcgccgtcaatgcgcgcccgatcgccgtgtcggtcaccgccgaggcg
gtgccgggtgcggcctctcaggtcgatctgacccgtaatgccaccggcgggccgttcgtg
gccgccgcggtggtcgcagtgctgccggcctcggccgggaccgccaccatcacccaggtg
ggtggtgcagcggcggcagcggcgcgcacttccggctttgtgcctgcggccactgcgcag
gcttcttcacccagcttcatgctgaccttcgtggcgaacccggctttcgtcggtcaggcc
accgtgcagttcaccttgtccaacgcgttcgccacctcggcggcggcaagcgtgaccttc
accgtggcgccgcggcgcgacccgagtgtggatgcggaagtgcgtggcctgatcgatgcg
cagtccgagtcgacgcggcgcttcgccaaggcgcagatcgacaacttccagcgccgtctg
gaagccacccaccgtggcggcagcacgctgagcaatgcagtgaccttccagccgacctcg
cattgccgccaggccgatcgcggcatcagcgcgcagccgtgcagcccggacacccaggat
gccgacaacgagttccgtgatgcgccggcgatggcgagcggcggcaacggcggtgcgcag
ggccagggcgacctgggcctgtgggtgggcggtgcgatccgctccggcagcctggacagg
caggccaacaccaacggcgtggacttccagaccgatggcttgagcgtgggtgcggactac
cggctggcgccgtcgctggcagtgggtgcgggcctgggttggggccgcgacgacagcgat
gtaggcaggaacggcagccactccaaggccaccgcctacaccatggcgctgtatgccagc
ttccatccgggcaaggcgtttttcttcgacaccctggtgggttatcagttgctgtcttac
gacctgcgtcgtttcgtcaccgacgacgcttcgatggccgaaggcagccgcgacggcaag
cagtggatcgcctcgctgtccagcggtgcagacctgcaacgcggcaatctgcagatcacc
ccgtatgcgcgggtggatgtggcgcgggcaaccctggatggctacgtcgaagatggcatc
gcgccgttcgcgctgcgctatgacgacatggatgtggccaccaccaccggcaacctgggc
ctgcgcctggaatggcgccgcgatgtggcctggggacgcctgaccccgcaggtccgcgtg
gagtatcagcgcgacttccagggccgcggcgacgcaacgctgggctatgccgacatcatc
ggtggcccggtgtatcgcaccggtcagaacgcgttcgatcgcaaccgcctgatggtcggt
atcggtgcggccttgctgaccgaacaaggcttgtcgacgcggctggaataccgcggcatc
accgacggcgacagcggcaacgatcagacctggatgatcaacctggaaaagaaatactga
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